RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 SELEP16581 610 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 PTAFRP25105 342 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 IGFBP7Q16270 282 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 XKRXQ6PP77 449 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 OR5AS1Q8N127 324 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 ZNF808Q8N4W9 903 aaPredicted RBP13.03□□□□□ -0.32
COL4A5-203ENST00000470339 OR51A2Q8NGJ7 313 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 OR13C9Q8NGT0 318 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 SPSB1Q96BD6 273 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
COL4A5-203ENST00000470339 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 KCNN3Q9UGI6 736 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 STEAP1Q9UHE8 339 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 SPATA2Q9UM82 520 aa13.03□□□□□ -0.32
COL4A5-203ENST00000470339 CD300LBA8K4G0 201 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 RGS5O15539 181 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 GMDSO60547 372 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 NRASP01111 189 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 SLC2A2P11168 524 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-203ENST00000470339 PRKACBP22694 351 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 ETV6P41212 452 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 RIN1Q13671 783 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 HLXQ14774 488 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-203ENST00000470339 CNN3Q15417 329 aaKnown RBP13.02□□□□□ -0.33
COL4A5-203ENST00000470339 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 C22orf34Q6ZV56 151 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 DNAAF1Q8NEP3 725 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 OR6M1Q8NGM8 313 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 OR1J1Q8NGS3 322 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 SSC4DQ8WTU2 575 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 HAVCR1Q96D42 359 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 CPNE2Q96FN4 548 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-203ENST00000470339 MARS2Q96GW9 593 aaKnown RBP13.02□□□□□ -0.33
COL4A5-203ENST00000470339 BBC3Q96PG8 261 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-203ENST00000470339 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 POFUT1Q9H488 388 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 PLGRKTQ9HBL7 147 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 HMG20AQ9NP66 347 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 COMMD3Q9UBI1 195 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 NDRG3Q9UGV2 375 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 ADAM30Q9UKF2 790 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 ETV7Q9Y603 341 aa13.02□□□□□ -0.33
COL4A5-203ENST00000470339 IGKV1-9A0A0C4DH69 117 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 CLDN25C9JDP6 229 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 THBDP07204 575 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 FAM157BP0CG42 384 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 CD40P25942 277 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 CALCRP30988 508 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 TNFSF8P32971 234 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 ZNF45Q02386 682 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 RAB11BQ15907 218 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 ZNF718Q3SXZ3 478 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 HES5Q5TA89 166 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 CCDC190Q86UF4 302 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 OR52N4Q8NGI2 321 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 ZNF671Q8TAW3 534 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 SLC25A40Q8TBP6 338 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 TRMT10AQ8TBZ6 339 aaKnown RBP13.01□□□□□ -0.33
COL4A5-203ENST00000470339 UBASH3BQ8TF42 649 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 CEP19Q96LK0 163 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 WFIKKN1Q96NZ8 548 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 OR2J1Q9GZK6 312 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 ABCB9Q9NP78 766 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 AKIP1Q9NQ31 210 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 MPC1Q9Y5U8 109 aa13.01□□□□□ -0.33
COL4A5-203ENST00000470339 APOA1P02647 267 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 HCKP08631 526 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 OCMP0CE72 109 aaPredicted RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 HTR2CP28335 458 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 GLRXP35754 106 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 ZNF93P35789 620 aaPredicted RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 UQCRFS1P47985 274 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 FUT6P51993 359 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 ZNF846Q147U1 533 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 SPANXN2Q5MJ10 180 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 MBNL2Q5VZF2 373 aaKnown RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 LRRC28Q86X40 367 aaPredicted RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 ZNF843Q8N446 348 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 JAGN1Q8N5M9 183 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 KLF14Q8TD94 323 aaPredicted RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 SLC25A28Q96A46 364 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 CMBLQ96DG6 245 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 WDR12Q9GZL7 423 aaKnown RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 OR51B6Q9H340 312 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 CXorf56Q9H5V9 222 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 LIN7BQ9HAP6 207 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 MRPL15Q9P015 296 aaKnown RBP13□□□□□ -0.33
COL4A5-203ENST00000470339 SLC7A11Q9UPY5 501 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 RHBDD3Q9Y3P4 386 aa13□□□□□ -0.33
COL4A5-203ENST00000470339 CADP27708 2225 aa12.99□□□□□ -0.33
COL4A5-203ENST00000470339 NKX2-6A6NCS4 301 aa12.99□□□□□ -0.33
COL4A5-203ENST00000470339 ANKRD30BLA7E2S9 258 aa12.99□□□□□ -0.33
COL4A5-203ENST00000470339 IQCF6A8MYZ5 107 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms