RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 SYT4Q9H2B2 425 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 PLK3Q9H4B4 646 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 MYOZ1Q9NP98 299 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-208ENST00000469585 RPRD1BQ9NQG5 326 aaKnown RBP5.34□□□□□ -1.55
PTCD3-208ENST00000469585 TUBG2Q9NRH3 451 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 CBLN4Q9NTU7 201 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 SLCO1C1Q9NYB5 712 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 PLEK2Q9NYT0 353 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 IL20RAQ9UHF4 553 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 KCNG2Q9UJ96 466 aa5.34□□□□□ -1.55
PTCD3-208ENST00000469585 TCRBV3S1A0A5B6 114 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 C5orf49A4QMS7 147 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 OR6C6A6NF89 314 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 PTGES3LE9PB15 166 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ATP6V1G2-DDX39BF2Z307 99 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 M0R233 179 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 CDC42EP2O14613 210 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ACOT8O14734 319 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 SGCEO43556 437 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 SOX14O95416 240 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 IGKV3-15P01624 115 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 CECR9P0C854 216 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 IGHV4-30-4P0DP06 118 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF12P17014 697 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 IGFBP5P24593 272 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 HSD11B1P28845 292 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ATP6V1E1P36543 226 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 PSMB10P40306 273 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 HTR5AP47898 357 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 GSSP48637 474 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 IST1P53990 364 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 NANOS2P60321 138 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 CDC42P60953 191 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 LSM6P62312 80 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ESRRGP62508 458 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 TUBA1BP68363 451 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 MS4A2Q01362 244 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 GABPB1Q06547 395 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 SNTB2Q13425 540 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ADIPOQQ15848 244 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 CARTPTQ16568 116 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF718Q3SXZ3 478 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 PAPPA-AS1Q5QFB9 102 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ARMC4Q5T2S8 1044 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 FAM27BQ5VT28 67 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 KRT80Q6KB66 452 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 TMEM154Q6P9G4 183 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 SHQ1Q6PI26 577 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 TUBA1AQ71U36 451 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 MEX3DQ86XN8 651 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 IQCF1Q8N6M8 205 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 NPEPL1Q8NDH3 523 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF540Q8NDQ6 660 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 NUP37Q8NFH4 326 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 OR4K13Q8NH42 304 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF519Q8TB69 540 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 SPTSSAQ969W0 71 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 RASD2Q96D21 266 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 FBXO17Q96EF6 278 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 MRPL48Q96GC5 212 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 CENPNQ96H22 339 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF479Q96JC4 524 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 HARBI1Q96MB7 349 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 FEVQ99581 238 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 PITX2Q99697 317 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 SH3GL3Q99963 347 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 RBM4BQ9BQ04 359 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 RHNO1Q9BSD3 238 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 PCGF1Q9BSM1 259 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 RBM4Q9BWF3 364 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 MRPL13Q9BYD1 178 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 HDHD2Q9H0R4 259 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF442Q9H7R0 627 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 NOX4Q9NPH5 578 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 CA10Q9NS85 328 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ARMC1Q9NVT9 282 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 IMPAD1Q9NX62 359 aa5.33□□□□□ -1.56
PTCD3-208ENST00000469585 NOP16Q9Y3C1 178 aaKnown RBP5.33□□□□□ -1.56
PTCD3-208ENST00000469585 ASH1LQ9NR48 2969 aaKnown RBP5.32□□□□□ -1.56
PTCD3-208ENST00000469585 IGHV2OR16-5A0A0B4J2B6 119 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 IGHV1-18A0A0C4DH31 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 hDV102S1A0JD36 115 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 DPRXA6NFQ7 191 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 H3BSA7 217 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 H7C1C5 153 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SURF4O15260 269 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 GAGE7O76087 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 BAG2O95816 211 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 TXNDC12O95881 172 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 OR4A8P0C604 315 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 TSPAN19P0C672 248 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 GAGE12FP0CL80 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 GAGE12GP0CL81 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 GAGE12IP0CL82 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 COX5BP10606 129 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 HIST1H1CP16403 213 aaKnown RBP5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SELEP16581 610 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 CDKN2AP42771 156 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms