RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MAP1BP46821 2468 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 MED12LQ86YW9 2145 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TPRP12270 2363 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TRBV2A0A0J9YWF9 115 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LOC100506127A0A0U1RQW1 187 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM269A0A1B0GVZ9 245 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 A0A1W2PPK0 400 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM129A0AVI4 362 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 C5orf49A4QMS7 147 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 DPPA5A6NC42 116 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TRIM64A6NGJ6 449 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LINC01548A6NM66 108 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF878C9JN71 531 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LOC110117498-PIK3R3F6TDL0 507 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 C16orf97H3BN30 126 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 P2RY10O00398 339 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ZG16O60844 167 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 SULT1C4O75897 302 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 PNPP00491 289 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 MMP7P09237 267 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CBR1P16152 277 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CD36P16671 472 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 GADD45AP24522 165 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 STOMP27105 288 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 DUSP1P28562 367 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CHRNB4P30926 498 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 OPRL1P41146 370 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 MAGEB1P43366 347 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 SOX2P48431 317 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ALDH3B2P48448 385 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CX3CR1P49238 355 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 GDI2P50395 445 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 IDH3GP51553 393 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 SH3BGRP55822 239 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF121P58317 390 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ACTA2P62736 377 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RPS25P62851 125 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 GRB2P62993 217 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ACTG2P63267 376 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 MFGE8Q08431 387 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ALKBH1Q13686 389 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 P2RY6Q15077 328 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RAB35Q15286 201 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TBCEQ15813 527 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 PCK2Q16822 640 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 GSG1Q2KHT4 349 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CDONQ4KMG0 1287 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF684Q5T5D7 378 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 SYT6Q5T7P8 510 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 UBE2UQ5VVX9 321 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RNLSQ5VYX0 342 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LIN54Q6MZP7 749 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF544Q6NX49 715 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RPL22L1Q6P5R6 122 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM65Q6PI78 240 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 STAC2Q6ZMT1 411 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 DCDC5Q6ZRR9 648 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 COMMD2Q86X83 199 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF676Q8N7Q3 588 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 STEAP2Q8NFT2 490 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 OR10S1Q8NGN2 331 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 OR52N1Q8NH53 320 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LILRB4Q8NHJ6 448 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ST7LQ8TDW4 575 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RNF133Q8WVZ7 376 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ASB5Q8WWX0 329 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 FCGR1BQ92637 280 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 SPTSSAQ969W0 71 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 MUCL1Q96DR8 90 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 PELI1Q96FA3 418 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RADILQ96JH8 1075 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 RITA1Q96K30 269 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 COG8Q96MW5 612 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 OPALINQ96PE5 141 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 SIGLEC11Q96RL6 698 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ATF6BQ99941 703 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CHCHD6Q9BRQ6 235 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 HDHD5Q9BXW7 423 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ACTR6Q9GZN1 396 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 PBOV1Q9GZY1 135 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 NAA50Q9GZZ1 169 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 OR51E2Q9H255 320 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 CDH20Q9HBT6 801 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 KCNJ16Q9NPI9 418 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 PNRC2Q9NPJ4 139 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ELOVL5Q9NYP7 299 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 OR52A1Q9UKL2 312 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LSM2Q9Y333 95 aaKnown RBP3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 R4GMQ9 66 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 ACACBO00763 2458 aa3.52□□□□□ -1.85
TMEM39A-204ENST00000468545 LOC100509620A0A075B734 347 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 C5orf63A6NC05 138 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR6C6A6NF89 314 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 ANKRD61A6NGH8 418 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 A6NIN4 97 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 OR5H1A6NKK0 313 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 TRIM64CA6NLI5 447 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 M0R135 149 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CCRL2O00421 344 aa3.51□□□□□ -1.85
TMEM39A-204ENST00000468545 CASKO14936 926 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms