RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 SGTBQ96EQ0 304 aa1.49□□□□□ -2.17
RBM39-226ENST00000468086 CSPG4P5Q96PW8 444 aa1.49□□□□□ -2.17
RBM39-226ENST00000468086 XPO6Q96QU8 1125 aaKnown RBP1.49□□□□□ -2.17
RBM39-226ENST00000468086 CALN1Q9BXU9 219 aa1.49□□□□□ -2.17
RBM39-226ENST00000468086 ACTR3CQ9C0K3 210 aaPredicted RBP1.49□□□□□ -2.17
RBM39-226ENST00000468086 A0A0A6YYD5 115 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 GABRPO00591 440 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 NME4O00746 187 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 KCNK2O95069 426 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 TRBV12-3P01733 135 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 FTH1P02794 183 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 TAGLN2P37802 199 aaKnown RBP1.48□□□□□ -2.17
RBM39-226ENST00000468086 OR12D2P58182 307 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 ZNF660Q6AZW8 331 aaPredicted RBP1.48□□□□□ -2.17
RBM39-226ENST00000468086 IGF2BP2-AS1Q96M15 143 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 GPR21Q99679 349 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 SSH2Q76I76 1423 aa1.48□□□□□ -2.17
RBM39-226ENST00000468086 PCNX2A6NKB5 2137 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 SLC9A3R1O14745 358 aaPredicted RBP1.47□□□□□ -2.17
RBM39-226ENST00000468086 PSPHP1O15172 72 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 SYNGR2O43760 224 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 HADHQ16836 314 aaKnown RBP1.47□□□□□ -2.17
RBM39-226ENST00000468086 PAGE2Q7Z2X7 111 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 TTC29Q8NA56 475 aaPredicted RBP1.47□□□□□ -2.17
RBM39-226ENST00000468086 RPEQ96AT9 228 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 RASD2Q96D21 266 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 PRRC1Q96M27 445 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 TGS1Q96RS0 853 aaKnown RBP1.47□□□□□ -2.17
RBM39-226ENST00000468086 RAB22AQ9UL26 194 aa1.47□□□□□ -2.17
RBM39-226ENST00000468086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.47□□□□□ -2.17
RBM39-226ENST00000468086 TSPOAP1O95153 1857 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 CCL15-CCL14A0A0B4J2E2 113 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 IGKV1-6A0A0C4DH72 117 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 IZUMO1RA6ND01 250 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 SDHAF1A6NFY7 115 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 SLC16A7O60669 478 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 WBP4O75554 376 aaKnown RBP1.46□□□□□ -2.18
RBM39-226ENST00000468086 NRASP01111 189 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 HRASP01112 189 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 KRASP01116 189 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 UQCRFS1P1P0C7P4 283 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 BCKDHBP21953 392 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 GGT2P36268 569 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 CCL15Q16663 113 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 FA2HQ7L5A8 372 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 S100PBPQ96BU1 408 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 C20orf24Q9BUV8 137 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 MS4A8Q9BY19 250 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 AGPAT4Q9NRZ5 378 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 TREX1Q9NSU2 369 aa1.46□□□□□ -2.18
RBM39-226ENST00000468086 STX18Q9P2W9 335 aaKnown RBP1.46□□□□□ -2.18
RBM39-226ENST00000468086 KIAA1671Q9BY89 1806 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 TSPAN11A1L157 253 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 ANKRD65E5RJM6 399 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 RNF13O43567 381 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 CD160O95971 181 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 IGKV1-39P01597 117 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 IGKV1D-39P04432 117 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 SLC35G6P0C7Q6 338 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 RAB5AP20339 215 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 PRSS3P35030 304 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 RAB7AP51149 207 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 TRDNQ13061 729 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 TPBGQ13641 420 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 C6orf99Q4VX62 202 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 CEP55Q53EZ4 464 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 LDLRAD2Q5SZI1 272 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 MUC7Q8TAX7 377 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 SFXN5Q8TD22 340 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 C8orf44Q96CB5 159 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 MRPL48Q96GC5 212 aaKnown RBP1.45□□□□□ -2.18
RBM39-226ENST00000468086 SNF8Q96H20 258 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 NUP58Q9BVL2 599 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 RBFOX1Q9NWB1 397 aaKnown RBP1.45□□□□□ -2.18
RBM39-226ENST00000468086 CAB39Q9Y376 341 aaPredicted RBP1.45□□□□□ -2.18
RBM39-226ENST00000468086 SAR1BQ9Y6B6 198 aa1.45□□□□□ -2.18
RBM39-226ENST00000468086 EIF3HO15372 352 aaKnown RBP eCLIP1.44□□□□□ -2.18
RBM39-226ENST00000468086 CCDC22O60826 627 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 OR5AC1P0C628 307 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 GTF2E2P29084 291 aaKnown RBP1.44□□□□□ -2.18
RBM39-226ENST00000468086 FOXA1P55317 472 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 KLF3P57682 345 aaPredicted RBP1.44□□□□□ -2.18
RBM39-226ENST00000468086 PDZD11Q5EBL8 140 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 WDR82Q6UXN9 313 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 SLC22A9Q8IVM8 553 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 CDH26Q8IXH8 852 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 ARL6IP6Q8N6S5 226 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 AKR7LQ8NHP1 331 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 TBL1XR1Q9BZK7 514 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 DSN1Q9H410 356 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 VSIRQ9H7M9 311 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 OR2S2Q9NQN1 319 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 TMEM106BQ9NUM4 274 aa1.44□□□□□ -2.18
RBM39-226ENST00000468086 LYARQ9NX58 379 aaKnown RBP1.44□□□□□ -2.18
RBM39-226ENST00000468086 TMEM72A0PK05 275 aa1.43□□□□□ -2.18
RBM39-226ENST00000468086 OVOL1O14753 267 aa1.43□□□□□ -2.18
RBM39-226ENST00000468086 ERI3O43414 337 aaKnown RBP1.43□□□□□ -2.18
RBM39-226ENST00000468086 OR2F2O95006 317 aa1.43□□□□□ -2.18
RBM39-226ENST00000468086 CCNB2O95067 398 aa1.43□□□□□ -2.18
RBM39-226ENST00000468086 CLTAP09496 248 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms