RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 IRF2P14316 349 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 ZNF823P16415 610 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 CA6P23280 308 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PYCR1P32322 319 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PSMB10P40306 273 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 RPS27P42677 84 aaKnown RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 MAGEA2P43356 314 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 MTNR1AP48039 350 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 HMGA2P52926 109 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PCK2Q16822 640 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 SPATS1Q496A3 300 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PRR31Q5SQ13 230 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 ZNF362Q5T0B9 420 aaPredicted RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 ZNF770Q6IQ21 691 aaPredicted RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 RPL13AP3Q6NVV1 102 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 LYPD2Q6UXB3 125 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 MRPL21Q7Z2W9 205 aaKnown RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 ZDHHC21Q8IVQ6 265 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 DEFB107AQ8IZN7 70 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 DRAXINQ8NBI3 349 aaPredicted RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 C19orf18Q8NEA5 215 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PROKR2Q8NFJ6 384 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 OR52L1Q8NGH7 329 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 OR8D4Q8NGM9 314 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 OR11L1Q8NGX0 322 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 OR2AE1Q8NHA4 323 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 SPRYD4Q8WW59 207 aaPredicted RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 ZNRF4Q8WWF5 429 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 SPTSSAQ969W0 71 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 SLC25A28Q96A46 364 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PPP1R14BQ96C90 147 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 TRIM15Q9C019 465 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 VCX3BQ9H321 246 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 PRDM13Q9H4Q3 707 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 UNKLQ9H9P5 680 aaKnown RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 VCX3AQ9NNX9 186 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 UFSP2Q9NUQ7 469 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 ARL8BQ9NVJ2 186 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 MRPL15Q9P015 296 aaKnown RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 CTSZQ9UBR2 303 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 NOP16Q9Y3C1 178 aaKnown RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 COMMD3-BMI1R4GMX3 469 aa5.85□□□□□ -1.47
SND1-205ENST00000467238 TET2Q6N021 2002 aaPredicted RBP5.85□□□□□ -1.47
SND1-205ENST00000467238 MDFIC2A0A1B0GVS7 189 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 LGALS8O00214 317 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 TNFRSF11BO00300 401 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 TNFRSF13BO14836 293 aaPredicted RBP5.84□□□□□ -1.47
SND1-205ENST00000467238 ENSAO43768 121 aaKnown RBP5.84□□□□□ -1.47
SND1-205ENST00000467238 GASTP01350 101 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 MMP9P14780 707 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 ATP6V1B2P21281 511 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 ENTPD1P49961 510 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 NPY4RP50391 375 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 FGF12P61328 243 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 IL13RA1P78552 427 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OR8G1Q15617 311 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 KCNJ8Q15842 424 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 GLYATL3Q5SZD4 288 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 DRAM2Q6UX65 266 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 C16orf89Q6UX73 402 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 BRD3OSQ6XYD6 125 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 RASSF6Q6ZTQ3 369 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 DCXRQ7Z4W1 244 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 LNX2Q8N448 690 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 LINC00471Q8N535 108 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 AQP11Q8NBQ7 271 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 SLC37A3Q8NCC5 494 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OR56B2PQ8NGI1 322 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OR51L1Q8NGJ5 315 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OR4C15Q8NGM1 316 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OR9Q1Q8NGQ5 310 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OR2T4Q8NH00 348 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 TAF15Q92804 592 aaKnown RBP eCLIP5.84□□□□□ -1.47
SND1-205ENST00000467238 COPS4Q9BT78 406 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 ADAT1Q9BUB4 502 aaKnown RBP5.84□□□□□ -1.47
SND1-205ENST00000467238 NMNAT2Q9BZQ4 307 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 OPA3Q9H6K4 179 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 ZNF696Q9H7X3 374 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 FN3KRPQ9HA64 309 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 NDE1Q9NXR1 346 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 ACTR3BQ9P1U1 418 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 RNF7Q9UBF6 113 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 TAGLN3Q9UI15 199 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 ARL2BPQ9Y2Y0 163 aa5.84□□□□□ -1.47
SND1-205ENST00000467238 TRAV38-1A0A0B4J264 116 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 TCRBV5S2A0A599 114 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 OOEPA6NGQ2 149 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 GGT3PA6NGU5 568 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 SRRM5B3KS81 715 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 ZNF879B4DU55 563 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 ZNF878C9JN71 531 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 HOXA3O43365 443 aaPredicted RBP5.83□□□□□ -1.48
SND1-205ENST00000467238 GMDSO60547 372 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 FCN3O75636 299 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 LHBP01229 141 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 GYPBP06028 91 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 SFTPBP07988 381 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 SPARCP09486 303 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 CLUP10909 449 aa5.83□□□□□ -1.48
SND1-205ENST00000467238 SLC2A1P11166 492 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms