RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 KCNJ15Q99712 375 aa8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 C1QTNF5Q9BXJ0 243 aa8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 DDX28Q9NUL7 540 aaKnown RBP8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 NKIRAS2Q9NYR9 191 aa8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 ERVK-18Q9QC07 812 aa8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 KLHDC2Q9Y2U9 406 aa8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 PEX16Q9Y5Y5 336 aa8.26□□□□□ -1.09
RTFDC1-205ENST00000466260 CCDC182A6NF36 153 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 GGT3PA6NGU5 568 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 ZAR1LA6NP61 321 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 IQCF6A8MYZ5 107 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 F5H5P2 479 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 J3QW42 95 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 TLX2O43763 284 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 XPNPEP2O43895 674 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 WBP4O75554 376 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 FADS2O95864 444 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 TGFAP01135 160 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 TACSTD2P09758 323 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 DEFA1P59665 94 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 DEFA3P59666 94 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 GRB2P62993 217 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF92Q03936 586 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 TIGD6Q17RP2 521 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 KRTAP27-1Q3LI81 207 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC25A30Q5SVS4 291 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 LAIR2Q6ISS4 152 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 FAM166AQ6J272 317 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 DRAM2Q6UX65 266 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 LRRN1Q6UXK5 716 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 FBXW12Q6X9E4 464 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 FAM57BQ71RH2 274 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 OR8G5Q8NG78 346 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 DYNC2LI1Q8TCX1 351 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 SPRYD4Q8WW59 207 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 PGAM5Q96HS1 289 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF582Q96NG8 517 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 DIRC2Q96SL1 478 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 CHCHD3Q9NX63 227 aaKnown RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 H2AFY2Q9P0M6 372 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 LAMP5Q9UJQ1 280 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 ZDHHC8Q9ULC8 765 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 KCNS2Q9ULS6 477 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 WIPI2Q9Y4P8 454 aa8.25□□□□□ -1.09
RTFDC1-205ENST00000466260 CSPG4Q6UVK1 2322 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 C2CD3Q4AC94 2353 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 FAM157AC9JC47 383 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 LOC110117498-PIK3R3F6TDL0 507 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 MLNRO43193 412 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 LMX1BO60663 402 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF205O95201 554 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 APOL3O95236 402 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 CYB5R3P00387 301 aaPredicted RBP8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TNFRSF1AP19438 455 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC2A5P22732 501 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TUBG1P23258 451 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC15A1P46059 708 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 PPP5CP53041 499 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF121P58317 390 aaPredicted RBP8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 OCLNQ16625 522 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 PCK2Q16822 640 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF181Q2M3W8 571 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF404Q494X3 552 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 KLHL22Q53GT1 634 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TEX30Q5JUR7 227 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC35D3Q5M8T2 416 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 PRAMEF6Q5VXH4 476 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 SLX4IPQ5VYV7 408 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 C12orf73Q69YU5 71 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 DCDC5Q6ZRR9 648 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 COLCA1Q6ZS62 124 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 KRT77Q7Z794 578 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 OR56B2PQ8NGI1 322 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 OR6Q1Q8NGQ2 317 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 OTOSQ8NHW6 89 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 MCFD2Q8NI22 146 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TMEM163Q8TC26 289 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 RNF133Q8WVZ7 376 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TIMD4Q96H15 378 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TBX5Q99593 518 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 GAL3ST1Q99999 423 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 MROQ9BYG7 248 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 NAA50Q9GZZ1 169 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 SP140LQ9H930 580 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 MARCH7Q9H992 704 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ISYNA1Q9NPH2 558 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 AKIP1Q9NQ31 210 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 TUBG2Q9NRH3 451 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 IKZF2Q9UKS7 526 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 COPS3Q9UNS2 423 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ARHGAP32A7KAX9 2087 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ZFHX3Q15911 3703 aa8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 ANK3Q12955 4377 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 FN1P02751 2386 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-205ENST00000466260 CCRL2O00421 344 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 XRCC2O43543 280 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 SULT1C4O75897 302 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 CD55P08174 381 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms