RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 TMIGD2Q96BF3 282 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 POM121L2Q96KW2 1035 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 FOXN4Q96NZ1 517 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 AMELYQ99218 206 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 CCDC32Q9BV29 185 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 ACTR6Q9GZN1 396 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 SLC22A4Q9H015 551 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 MMP27Q9H306 513 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 PLEKHA1Q9HB21 404 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 TCF7L1Q9HCS4 588 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 TXNL4BQ9NX01 149 aaKnown RBP5.22□□□□□ -1.57
CHMP3-206ENST00000466032 ZNF224Q9NZL3 707 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 CGGBP1Q9UFW8 167 aaPredicted RBP5.22□□□□□ -1.57
CHMP3-206ENST00000466032 GTF2A1LQ9UNN4 478 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 KLHDC2Q9Y2U9 406 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 SLC25A15Q9Y619 301 aa5.22□□□□□ -1.57
CHMP3-206ENST00000466032 DSPP15924 2871 aaKnown RBP5.22□□□□□ -1.57
CHMP3-206ENST00000466032 INTS1Q8N201 2190 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 BSNQ9UPA5 3926 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 LOC100506127A0A0U1RQW1 187 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 C5orf49A4QMS7 147 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 E9PI62 339 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 LRRTM2O43300 516 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 TBX1O43435 398 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CLDN14O95500 239 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 LALBAP00709 142 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 IGLV3-1P01715 115 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 TTRP02766 147 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 ALDOBP05062 364 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 ADRA2AP08913 450 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 RAC2P15153 192 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 ZNF20P17024 532 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PRKACAP17612 351 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 SRMP19623 302 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 BTF3P20290 206 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 GADD45AP24522 165 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 APEX1P27695 318 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 THBS4P35443 961 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 GNALP38405 381 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PSMB10P40306 273 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 RPS27P42677 84 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 RORCP51449 518 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 NANOS3P60323 173 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 TNK1Q13470 666 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 RIN1Q13671 783 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CNN3Q15417 329 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 HIKESHIQ53FT3 197 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 C9orf135Q5VTT2 229 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 GLT8D1Q68CQ7 371 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 MZT2AQ6P582 158 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 SHISA2Q6UWI4 295 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PLXDC2Q6UX71 529 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 C3P1Q6ZMU1 363 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 FAM57BQ71RH2 274 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 UTS2BQ765I0 119 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PRSS45Q7RTY3 260 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CEACAM19Q7Z692 300 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 MDP1Q86V88 176 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 FJX1Q86VR8 437 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 COMMD2Q86X83 199 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PRSS35Q8N3Z0 413 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PARP16Q8N5Y8 322 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 WDR31Q8NA23 367 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 RELL2Q8NC24 303 aaPredicted RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 SEMA6DQ8NFY4 1073 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 OR8B12Q8NGG6 310 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 OR6Q1Q8NGQ2 317 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 OR13C3Q8NGS6 347 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 AKR7LQ8NHP1 331 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 TSEN15Q8WW01 171 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CAPSLQ8WWF8 208 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 TMEM106AQ96A25 262 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CCDC120Q96HB5 630 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CMTM3Q96MX0 182 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 ZNF75AQ96N20 296 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 DERL3Q96Q80 235 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PDCD1LG2Q9BQ51 273 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CHCHD6Q9BRQ6 235 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 TMED9Q9BVK6 235 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 DCSTAMPQ9H295 470 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 ESRP2Q9H6T0 727 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 PCDHB16Q9NRJ7 776 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 ZNF275Q9NSD4 429 aaPredicted RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CCDC59Q9P031 241 aaKnown RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 GPR160Q9UJ42 338 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 SH3BGRL2Q9UJC5 107 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 V9GYS6 101 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CACNA1BQ00975 2339 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 RP1L1Q8IWN7 2480 aaPredicted RBP5.21□□□□□ -1.58
CHMP3-206ENST00000466032 CHD6Q8TD26 2715 aa5.21□□□□□ -1.58
CHMP3-206ENST00000466032 A0A075B6Q4 140 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 TRBV5-7A0A0A0MS05 114 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 LOC107986453A0A1B0GWG9 222 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 PRR32B1ATL7 298 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 H3BUI4 141 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 PSMD9O00233 223 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 CASKO14936 926 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 GATCO43716 136 aaKnown RBP5.2□□□□□ -1.58
CHMP3-206ENST00000466032 B3GALNT1O75752 331 aa5.2□□□□□ -1.58
CHMP3-206ENST00000466032 PNPP00491 289 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms