RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CMTM3Q96MX0 182 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PDCD1LG2Q9BQ51 273 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CHCHD6Q9BRQ6 235 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CENPOQ9BU64 300 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 MRI1Q9BV20 369 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PBOV1Q9GZY1 135 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 DCSTAMPQ9H295 470 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 OPA3Q9H6K4 179 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 RNF121Q9H920 327 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 GRIP1Q9Y3R0 1128 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 SLC25A15Q9Y619 301 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 SVILO95425 2214 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 SHANK1Q9Y566 2161 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 RTTNQ86VV8 2226 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 PSMD9O00233 223 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 PDCD5O14737 125 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 XRCC2O43543 280 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 MTRF1O75570 445 aaKnown RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 RPP14O95059 124 aaKnown RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 ALDOBP05062 364 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 CD2P06729 351 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF182P17025 639 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 IGFBP3P17936 291 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 STOMP27105 288 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 DDOSTP39656 456 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 HTR5AP47898 357 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 SLC6A9P48067 706 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 SERPINB10P48595 397 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 CX3CR1P49238 355 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 RORCP51449 518 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 PRKXP51817 358 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF121P58317 390 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 VBP1P61758 197 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 NCS1P62166 190 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 PRR30Q53SZ7 412 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF774Q6NX45 483 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF529Q6P280 563 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 UNQ6126/PRO20091Q6UXV3 157 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 UTS2BQ765I0 119 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 BHLHA15Q7RTS1 189 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF584Q8IVC4 421 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 SERPINA12Q8IW75 414 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 RPRMLQ8N4K4 120 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZFP41Q8N8Y5 198 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 OR5L1Q8NGL2 311 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 LILRB4Q8NHJ6 448 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 ACOT12Q8WYK0 555 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 HSD17B8Q92506 261 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 RGP1Q92546 391 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 SLC25A46Q96AG3 418 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 APOBEC3DQ96AK3 386 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 SGK3Q96BR1 496 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 PGAM5Q96HS1 289 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 DERL3Q96Q80 235 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 MLST8Q9BVC4 326 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 TMED9Q9BVK6 235 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 SLIRPQ9GZT3 109 aaKnown RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 OPN3Q9H1Y3 402 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 MMP27Q9H306 513 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 EXOSC4Q9NPD3 245 aaKnown RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF275Q9NSD4 429 aaPredicted RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 SNTG1Q9NSN8 517 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 CCDC59Q9P031 241 aaKnown RBP4.73□□□□□ -1.65
VPS41-211ENST00000466017 ZNF319Q9P2F9 582 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 TINAGQ9UJW2 476 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 V9GYS6 101 aa4.73□□□□□ -1.65
VPS41-211ENST00000466017 LOC100509620A0A075B734 347 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TRGV8A0A0C4DH27 118 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 LOC100506127A0A0U1RQW1 187 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 A0A1B0GVI7 797 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 A0A1W2PPW3 197 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 F5H5K5 113 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 C16orf97H3BN30 126 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 CCL21O00585 134 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 SYT7O43581 403 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 DHRS3O75911 302 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TPPPO94811 219 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 CDRT1O95170 752 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 HLA-HP01893 362 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 PATE4P0C8F1 98 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 OCM2P0CE71 109 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 CD79AP11912 226 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 ZNF35P13682 527 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 MYL9P24844 172 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 CHRNB4P30926 498 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 SDC2P34741 201 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 APLNRP35414 380 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 THBS4P35443 961 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 SOX6P35712 828 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 PEX19P40855 299 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 ASCL1P50553 236 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 SORDQ00796 357 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 MFGE8Q08431 387 aaPredicted RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 FHL2Q14192 279 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 ST3GAL2Q16842 350 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TBC1D28Q2M2D7 210 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 HSD17B12Q53GQ0 312 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 CEP78Q5JTW2 689 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 BCL2L15Q5TBC7 163 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms