RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 LYL1P12980 280 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 AGAP20933 346 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 FCGR2CP31995 323 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 GFERP55789 205 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 TMEM33P57088 247 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 IL15RAQ13261 267 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 IAH1Q2TAA2 248 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 TTLL10Q6ZVT0 673 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 C1QL2Q7Z5L3 287 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 SEBOXQ9HB31 216 aaPredicted RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 SOHLH2Q9NX45 425 aa11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 LSM5Q9Y4Y9 91 aaKnown RBP11.14□□□□□ -0.63
CLCNKA-204ENST00000464764 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CDC14BO60729 498 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 AHSA1O95433 338 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 DDAH2O95865 285 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 MT-ATP6P00846 226 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 PGCP20142 388 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CDAP32320 146 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 OR3A2P47893 321 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 SLC6A8P48029 635 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CLINT1Q14677 625 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 MIDNQ504T8 468 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 TMEM240Q5SV17 173 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF721Q8TF20 911 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 SLC46A1Q96NT5 459 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CDC6Q99741 560 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 GABRG3Q99928 467 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 LANCL2Q9NS86 450 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 EHFQ9NZC4 300 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 ASXL3Q9C0F0 2248 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 PCDH15Q96QU1 1955 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 NPIPA5E9PKD4 350 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CTSEP14091 401 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 MMP16P51512 607 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 POLR2HP52434 150 aaKnown RBP11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CSNK2A1P68400 391 aaPredicted RBP11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 PLCXD2Q0VAA5 305 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 MFAP5Q13361 173 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 C5orf46Q6UWT4 87 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 ABHD12BQ7Z5M8 362 aaPredicted RBP11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 OR5AS1Q8N127 324 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF561Q8N587 486 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 CSNK2A3Q8NEV1 391 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 RNF133Q8WVZ7 376 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 ASH2LQ9UBL3 628 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 NPIPA1Q9UND3 350 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 MYO7BQ6PIF6 2116 aa11.13□□□□□ -0.63
CLCNKA-204ENST00000464764 IGHV5-51A0A0C4DH38 117 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 FRG2CA6NGY1 282 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 S100A8P05109 93 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 PTGER4P35408 488 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 SNU13P55769 128 aaKnown RBP11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 SHISA6Q6ZSJ9 500 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF248Q8NDW4 579 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 AKR7LQ8NHP1 331 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 GPER1Q99527 375 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 RFNGQ9Y644 331 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 H3BML4 177 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 K7EPK0 472 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 LY86O95711 162 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 IGKV3-11P04433 115 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 HCKP08631 526 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF20P17024 532 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 GSK3AP49840 483 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 ACY1Q03154 408 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 PCK2Q16822 640 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 VAX1Q5SQQ9 334 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 KLHL24Q6TFL4 600 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 FAM71E2Q8N5Q1 922 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 THAP3Q8WTV1 239 aaPredicted RBP11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 ASB10Q8WXI3 467 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 MRPL38Q96DV4 380 aaKnown RBP11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 TGM7Q96PF1 710 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 TMEM59Q9BXS4 323 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 RGCCQ9H4X1 137 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 OBP2AQ9NY56 170 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 VDAC3Q9Y277 283 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 ALG1L2C9J202 215 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 TSPAN15O95858 294 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 CA3P07451 260 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 RAB5AP20339 215 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 FPR2P25090 351 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 NUP54Q7Z3B4 507 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 CNTNAP3Q9BZ76 1288 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 OR51M1Q9H341 326 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms