RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 M0QZK8 103 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 AQP9O43315 295 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 CHST1O43916 411 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 MED6O75586 246 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 CTAG2O75638 210 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SRP72O76094 671 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 GABARAPO95166 117 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SLC25A14O95258 325 aaPredicted RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 IFNA4P05014 189 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 RBP1P09455 135 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ACSM4P0C7M7 580 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 STAG3L2P0CL84 134 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SMIM6P0DI80 62 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 NQO1P15559 274 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF250P15622 560 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 DCKP27707 260 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 RPS9P46781 194 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 OMPP47874 163 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 HCAR3P49019 387 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SLC11A1P49279 550 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 NKX2-5P52952 324 aaPredicted RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 OR2B6P58173 313 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 DEFA6Q01524 100 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SLC25A11Q02978 314 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 MXD1Q05195 221 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 CYP24A1Q07973 514 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 GPR176Q14439 515 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 POU6F1Q14863 301 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 TMED2Q15363 201 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNHIT3Q15649 155 aaPredicted RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 TOMM34Q15785 309 aaPredicted RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 MRPL23Q16540 153 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 POU2AF1Q16633 256 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 DEFB116Q30KQ4 102 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 HNRNPA1L2Q32P51 320 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 HSDL1Q3SXM5 330 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 PTPN20Q4JDL3 420 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 XKR4Q5GH76 650 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 PIP5KL1Q5T9C9 394 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 DHRS4L2Q6PKH6 230 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ZFP2Q6ZN57 461 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM92BQ6ZTR7 304 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 BHLHA15Q7RTS1 189 aaPredicted RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 PAGE2Q7Z2X7 111 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 BIVMQ86UB2 503 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 GID4Q8IVV7 300 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SAXO1Q8IYX7 474 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 KIF2BQ8N4N8 673 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 COMMD1Q8N668 190 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 BPIFCQ8NFQ6 507 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 MAFIPQ8WZ33 124 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 YIPF5Q969M3 257 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 STARD4Q96DR4 205 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF514Q96K75 400 aaPredicted RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 CAPZA3Q96KX2 299 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 OR5B12Q96R08 314 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ACBD6Q9BR61 282 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SEC22CQ9BRL7 303 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 SLC25A2Q9BXI2 301 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 OR52A5Q9H2C5 316 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 OR51B6Q9H340 312 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 GAL3ST2Q9H3Q3 398 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 ASCL3Q9NQ33 180 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 RGS18Q9NS28 235 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM49BQ9NUQ9 324 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 FGFR1OP2Q9NVK5 253 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 LYARQ9NX58 379 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 LGALS13Q9UHV8 139 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 PRO0461Q9UI25 63 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 PSG11Q9UQ72 335 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 PUS1Q9Y606 427 aaKnown RBP eCLIP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 KCNE3Q9Y6H6 103 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 CLUHO75153 1309 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 NRCAMQ92823 1304 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM135BQ49AJ0 1406 aa2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 TCOF1Q13428 1488 aaKnown RBP2.31□□□□□ -2.04
HMGXB4-205ENST00000464480 TRBV9A0A0B4J1U6 114 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 IGHV5-51A0A0C4DH38 117 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM92AA1XBS5 289 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CCDC160A6NGH7 325 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PDZK1P1A8MUH7 402 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SUPT3HB4E1H0 165 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 LRRN3E7EW58 273 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 hCG_2039718K7EN88 272 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF701M0R085 212 aaPredicted RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CHP2O43745 196 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 DNAJB6O75190 326 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 FKBP6O75344 327 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 IGKV3-11P04433 115 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 HLA-DPB1P04440 258 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 IFNA6P05013 189 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CRYGCP07315 174 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 LINC00614P0C842 121 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 COX5BP10606 129 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CBR1P16152 277 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 RAB3BP20337 219 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MSR1P21757 451 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 G0S2P27469 103 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 GTF2E2P29084 291 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CEACAM6P40199 344 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms