RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RANBP3Q9H6Z4 567 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-210ENST00000464078 METTL8Q9H825 291 aaKnown RBP14.13□□□□□ -0.15
HMGN1-210ENST00000464078 TENM3Q9P273 2699 aa14.13□□□□□ -0.15
HMGN1-210ENST00000464078 TVP23AA6NH52 213 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 KIR2DS4P43632 304 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 PRB3Q04118 309 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-210ENST00000464078 SF3A3Q12874 501 aaKnown RBP eCLIP14.12□□□□□ -0.156e-7■□□□□ 11.3
HMGN1-210ENST00000464078 TSPAN31Q12999 210 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 IKZF1Q13422 519 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 TEX30Q5JUR7 227 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 SLC35F1Q5T1Q4 408 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 RPL13AP3Q6NVV1 102 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 LYPD4Q6UWN0 246 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 CYB561A3Q8NBI2 242 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 OR4C13Q8NGP0 309 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 ZNRF4Q8WWF5 429 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 SEH1LQ96EE3 360 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 HAO2Q9NYQ3 351 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 MAB21L2Q9Y586 359 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 CDH10Q9Y6N8 788 aa14.12□□□□□ -0.15
HMGN1-210ENST00000464078 hCG_38984A0A1B0GV85 526 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 H3BUX3 64 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 SELLP14151 372 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 CFL1P23528 166 aaKnown RBP14.11□□□□□ -0.15
HMGN1-210ENST00000464078 ENTPD1P49961 510 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 NUDT2P50583 147 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 DLX1P56177 255 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 GRB2P62993 217 aaKnown RBP14.11□□□□□ -0.15
HMGN1-210ENST00000464078 SPIBQ01892 262 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 TAF13Q15543 124 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 FAM189A2Q15884 450 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 AANATQ16613 207 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 GLYATQ6IB77 296 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 ZNF788Q6ZQV5 615 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 PNKDQ8N490 385 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 OR52L1Q8NGH7 329 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 OR10Z1Q8NGY1 313 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 PPP1R35Q8TAP8 253 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 ITPKCQ96DU7 683 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 RAB3IPQ96QF0 476 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-210ENST00000464078 DNAH3Q8TD57 4116 aa14.11□□□□□ -0.15
HMGN1-210ENST00000464078 A0A1W2PRD5 423 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 A0A1W2PRF3 423 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 A0A1W2PRM7 423 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 NKX6-3A6NJ46 265 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 CDIPTO14735 213 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 SPARCP09486 303 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 SLC15A1P46059 708 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 CAV3P56539 151 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 MXRA7P84157 204 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 SNCBQ16143 134 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 TIGD6Q17RP2 521 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 PGBD2Q6P3X8 592 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 CRIP3Q6Q6R5 217 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 PRSS45Q7RTY3 260 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 KLHDC1Q8N7A1 406 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 CSNK2A3Q8NEV1 391 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 OR52H1Q8NGJ2 320 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 ANGPTL6Q8NI99 470 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 H1FXQ92522 213 aaKnown RBP14.1□□□□□ -0.15
HMGN1-210ENST00000464078 REEP6Q96HR9 211 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 TOR3AQ9H497 397 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 EGLN3Q9H6Z9 239 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 GORASP2Q9H8Y8 452 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 SP140LQ9H930 580 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 RAB18Q9NP72 206 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 SPAG4Q9NPE6 437 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 CENPMQ9NSP4 180 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 SIGLEC9Q9Y336 463 aa14.1□□□□□ -0.15
HMGN1-210ENST00000464078 TBX1O43435 398 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 PRB2P02812 416 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-210ENST00000464078 FMO3P31513 532 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 GNALP38405 381 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 CX3CR1P49238 355 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 PSME3P61289 254 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 IL5RAQ01344 420 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 KLHL12Q53G59 568 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 FTMTQ8N4E7 242 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 SLC37A3Q8NCC5 494 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 OR51L1Q8NGJ5 315 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 OR9Q1Q8NGQ5 310 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 OR2T6Q8NHC8 308 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 GNPDA2Q8TDQ7 276 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 SGK3Q96BR1 496 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 MED30Q96HR3 178 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 PYURFQ96I23 114 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 AJUBAQ96IF1 538 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 GAFA1Q96PS6 74 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 SSX3Q99909 188 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 MICU1Q9BPX6 476 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 PAPOLGQ9BWT3 736 aaKnown RBP14.09□□□□□ -0.15
HMGN1-210ENST00000464078 NMNAT2Q9BZQ4 307 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 WDR13Q9H1Z4 485 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 IL20Q9NYY1 176 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 DNAJB11Q9UBS4 358 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 SLC25A10Q9UBX3 287 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-210ENST00000464078 FOXJ3Q9UPW0 622 aa14.09□□□□□ -0.15
HMGN1-210ENST00000464078 COL7A1Q02388 2944 aa14.08□□□□□ -0.15
HMGN1-210ENST00000464078 DHRS12A0PJE2 317 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms