RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SELLP14151 372 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 HIST1H1CP16403 213 aaKnown RBP11.76□□□□□ -0.53
SMC1A-204ENST00000463684 AMY2BP19961 511 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 GMFBP60983 142 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 CSNK2BP67870 215 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 DGCR6Q14129 220 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 AGBL2Q5U5Z8 902 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 STUMQ69YW2 141 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 CBLL1Q75N03 491 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 CPLX4Q7Z7G2 160 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 WDR86Q86TI4 376 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 WFDC9Q8NEX5 89 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 COPS4Q9BT78 406 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 SNTG1Q9NSN8 517 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 SERTAD4Q9NUC0 356 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 MRGBPQ9NV56 204 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 ENPP4Q9Y6X5 453 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 ARPC3O15145 178 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 CHST1O43916 411 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 GLCEO94923 617 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 PAICSP22234 425 aaKnown RBP11.75□□□□□ -0.53
SMC1A-204ENST00000463684 SLC6A6P31641 620 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 OTX1P32242 354 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-204ENST00000463684 BMXP51813 675 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 PRKXP51817 358 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 LGALS4P56470 323 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 CAV3P56539 151 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 CD69Q07108 199 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 HABP2Q14520 560 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-204ENST00000463684 MAPRE2Q15555 327 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 CCBE1Q6UXH8 406 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-204ENST00000463684 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 CYB561A3Q8NBI2 242 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 FANK1Q8TC84 345 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 KCNJ15Q99712 375 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 SIKE1Q9BRV8 207 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 IFT27Q9BW83 186 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 ZNF702PQ9H963 129 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 MRPL22Q9NWU5 206 aaKnown RBP11.75□□□□□ -0.53
SMC1A-204ENST00000463684 AP3M1Q9Y2T2 418 aa11.75□□□□□ -0.53
SMC1A-204ENST00000463684 LOC100653049A0A140TA62 436 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 OR6C68A6NDL8 312 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 CXCR6O00574 342 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 TBX1O43435 398 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 KRT34O76011 436 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 SLC2A1P11166 492 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 ANOS1P23352 680 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 PAX6P26367 422 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 GNALP38405 381 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
SMC1A-204ENST00000463684 ARSJQ5FYB0 599 aaPredicted RBP11.74□□□□□ -0.53
SMC1A-204ENST00000463684 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 Q8N2B8 174 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 PAPD5Q8NDF8 572 aaKnown RBP11.74□□□□□ -0.53
SMC1A-204ENST00000463684 SDR9C7Q8NEX9 313 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 SPSB4Q96A44 273 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 AJUBAQ96IF1 538 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 RAB3IPQ96QF0 476 aaPredicted RBP11.74□□□□□ -0.53
SMC1A-204ENST00000463684 MICU1Q9BPX6 476 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 FN3KQ9H479 309 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 HEXA-AS1Q9H8Q6 139 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 CENPMQ9NSP4 180 aa11.74□□□□□ -0.53
SMC1A-204ENST00000463684 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 SIGLEC5O15389 551 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 IDH3BO43837 385 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 SERPINA1P01009 418 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 ACAA1P09110 424 aaPredicted RBP11.73□□□□□ -0.53
SMC1A-204ENST00000463684 MSX2P35548 267 aaPredicted RBP11.73□□□□□ -0.53
SMC1A-204ENST00000463684 GABRA2P47869 451 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 FAM3AP98173 230 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 DGUOKQ16854 277 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 TIGD6Q17RP2 521 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 SLC16A9Q7RTY1 509 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 DCXRQ7Z4W1 244 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 ZDHHC21Q8IVQ6 265 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 FAM185AQ8N0U4 392 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 OR10Z1Q8NGY1 313 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 ANGPTL6Q8NI99 470 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 PIFOQ8TCI5 191 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 OR5M11Q96RB7 305 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 DDOQ99489 341 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 PRSS22Q9GZN4 317 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 TLNRD1Q9H1K6 362 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 WDR13Q9H1Z4 485 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 OR52D1Q9H346 318 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 SP140LQ9H930 580 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 INTS9Q9NV88 658 aaKnown RBP11.73□□□□□ -0.53
SMC1A-204ENST00000463684 NOTCH3Q9UM47 2321 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 DNAH3Q8TD57 4116 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 TENM3Q9P273 2699 aa11.73□□□□□ -0.53
SMC1A-204ENST00000463684 TRBV23-1A0A0A0MS06 115 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 TRBV4-1A0A0J9YWV2 114 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 A0A1W2PRX2 142 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 TVP23AA6NH52 213 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 ANXA2P2A6NMY6 339 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 PF4V1P10720 104 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms