RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 BCO1Q9HAY6 547 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
HDAC6-213ENST00000462730 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 IFNA7P01567 189 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 IGLV3-1P01715 115 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 ERCC1P07992 297 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 CPN1P15169 458 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 HTR5AP47898 357 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 FGD2Q7Z6J4 655 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 SKA3Q8IX90 412 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 FGFBP3Q8TAT2 258 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 C7orf50Q9BRJ6 194 aaKnown RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 OR2H1Q9GZK4 316 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 WNT5BQ9H1J7 359 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 METTL17Q9H7H0 456 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 MYEF2Q9P2K5 600 aaKnown RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 TIMM10BQ9Y5J6 103 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 TRAV18A0A075B6X5 111 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 MEIKINA0A087WXM9 373 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 OR6C6A6NF89 314 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 LDLRAD4O15165 306 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 FARS2O95363 451 aaKnown RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 MT-ND4P03905 459 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 H2AFB2P0C5Z0 115 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 EIF2S3P41091 472 aaKnown RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 ARF1P84077 181 aaKnown RBP12.65□□□□□ -0.38
HDAC6-213ENST00000462730 PSG4Q00888 419 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 DYRK1AQ13627 763 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 ST3GAL2Q16842 350 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 C9orf135Q5VTT2 229 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 DRAM2Q6UX65 266 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 BTN2A1Q7KYR7 527 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 OR5AS1Q8N127 324 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 APH1AQ96BI3 265 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 GAL3ST1Q99999 423 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
HDAC6-213ENST00000462730 MGAQ8IWI9 3026 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 K7EM74 188 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 GABRA1P14867 456 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 SNAI3Q3KNW1 292 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 CLLU1Q5K131 121 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 NUFIP2Q7Z417 695 aaKnown RBP12.64□□□□□ -0.39
HDAC6-213ENST00000462730 BEST4Q8NFU0 473 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 OR56B4Q8NH76 319 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 DACT3Q96B18 629 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-213ENST00000462730 TAAR6Q96RI8 345 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 UQCC2Q9BRT2 126 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 V9GYS6 101 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
HDAC6-213ENST00000462730 DHRS3O75911 302 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 WISP2O76076 250 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ECDO95905 644 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF93P35789 620 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 CAPZA1P52907 286 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 AP3S2P59780 193 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 HGFACQ04756 655 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 SNTB2Q13425 540 aaKnown RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 STK11Q15831 433 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 KRTAP27-1Q3LI81 207 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 LGALSLQ3ZCW2 172 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 Q6ZS92 163 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF100Q8IYN0 542 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 SLC38A6Q8IZM9 456 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 SPACA5Q96QH8 159 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ACTR6Q9GZN1 396 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 PRDM14Q9GZV8 571 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 NARFLQ9H6Q4 476 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 DLL4Q9NR61 685 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 UPB1Q9UBR1 384 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 SLC22A20A6NK97 555 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 SSNA1O43805 119 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 BPNT1O95861 308 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 TGM6O95932 706 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 HCKP08631 526 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 MMP7P09237 267 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 DNASE1P24855 282 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 THBS4P35443 961 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF81P51508 661 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 PMPCAQ10713 525 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF627Q7L945 461 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 RNF144BQ7Z419 303 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 OR52H1Q8NGJ2 320 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 C20orf85Q9H1P6 137 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 CLEC4MQ9H2X3 399 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-213ENST00000462730 SCP2D1Q9UJQ7 156 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
HDAC6-213ENST00000462730 ACACAQ13085 2346 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms