RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FAM90A7PA6NKC0 464 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 SH2D7A6NKC9 451 aaPredicted RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 HSPB2A8KAH6 182 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 FAM90A22PA8MWA6 464 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 FAM90A12PA8MX19 464 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 FAM90A23PA8MXZ1 464 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 LRRTM2O43300 516 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 PLPP2O43688 288 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 GPX5O75715 221 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 RPP14O95059 124 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TGM6O95932 706 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 PRB1P04280 392 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CD53P19397 219 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 MSR1P21757 451 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TNFSF8P32971 234 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TGFBR1P36897 503 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 PSMB10P40306 273 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TGM4P49221 684 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 NCS1P62166 190 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 LSM6P62312 80 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 RPS25P62851 125 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 SLC3A1Q07837 685 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 MRPL28Q13084 256 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CDK5R1Q15078 307 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 HSPB2Q16082 182 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CCDC58Q4VC31 144 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 KRTCAP3Q53RY4 240 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 RIPPLY2Q5TAB7 128 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TSPO2Q5TGU0 170 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 LIPNQ5VXI9 398 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TMEM268Q5VZI3 342 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 DMKNQ6E0U4 476 aaPredicted RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 RPL22L1Q6P5R6 122 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CORO6Q6QEF8 472 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 ARL9Q6T311 187 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 LRRN1Q6UXK5 716 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 FOXL2NBQ6ZUU3 175 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 NUFIP2Q7Z417 695 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 KRT77Q7Z794 578 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF100Q8IYN0 542 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF679Q8IYX0 411 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 OR2AJ1Q8NGZ0 328 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 OR52N5Q8NH56 324 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 HAVCR2Q8TDQ0 301 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 SCARB1Q8WTV0 552 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 HTRA1Q92743 480 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 OR8B4Q96RC9 309 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 DCUN1D5Q9BTE7 237 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CENPOQ9BU64 300 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TMED9Q9BVK6 235 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 MROQ9BYG7 248 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 LINC00470Q9BZP3 86 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 SLCO5A1Q9H2Y9 848 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 C1orf198Q9H425 327 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 RNF167Q9H6Y7 350 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 ELOVL3Q9HB03 270 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CRLF2Q9HC73 371 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 GLRX2Q9NS18 164 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 PTTG2Q9NZH5 202 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CLCF1Q9UBD9 225 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 CYB5R1Q9UHQ9 305 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 HSF4Q9ULV5 492 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 POLR1DQ9Y2S0 133 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 HELZ2Q9BYK8 2649 aaKnown RBP6.36□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF462Q96JM2 2506 aa6.36□□□□□ -1.39
UBE4B-204ENST00000462658 TRBV2A0A0J9YWF9 115 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 TRDV1A0A1B0GX56 115 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF254O75437 659 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 IGHV3-9P01782 118 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 HLA-DPB1P04440 258 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 H2BFMP0C1H6 154 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF182P17025 639 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 NPR2P20594 1047 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 UGT2B10P36537 528 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 GDI2P50395 445 aaKnown RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 RIDAP52758 137 aaKnown RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 MRPS34P82930 218 aaKnown RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 FABP5Q01469 135 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ROR2Q01974 943 aaKnown RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 SF3B4Q15427 424 aaKnown RBP eCLIP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 TRAM1Q15629 374 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 CEACAM16Q2WEN9 425 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 FAM27BQ5VT28 67 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF324BQ6AW86 544 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 CD200R1LQ6Q8B3 271 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 DEGS2Q6QHC5 323 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 USP43Q70EL4 1123 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 LINGO2Q7L985 606 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 LRRC18Q8N456 261 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 MS4A15Q8N5U1 240 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 TEX19Q8NA77 164 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 NDNFQ8TB73 568 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ST7LQ8TDW4 575 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 RNF133Q8WVZ7 376 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 GHSRQ92847 366 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 NABP1Q96AH0 204 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 APH1AQ96BI3 265 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 SLAMF6Q96DU3 332 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms