RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RTL8AQ9BWD3 113 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 PAPOLGQ9BWT3 736 aaKnown RBP12.7□□□□□ -0.38
SKA3-204ENST00000462482 ABCB9Q9NP78 766 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 DNAJB11Q9UBS4 358 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 TAGLN3Q9UI15 199 aa12.7□□□□□ -0.38
SKA3-204ENST00000462482 DHRS12A0PJE2 317 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 C5orf63A6NC05 138 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 GASTP01350 101 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 FAM3AP98173 230 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 IKZF1Q13422 519 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 WDR38Q5JTN6 314 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 FAM57BQ71RH2 274 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 SHFQ7M4L6 423 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.69□□□□□ -0.38
SKA3-204ENST00000462482 ERI1Q8IV48 349 aaKnown RBP12.69□□□□□ -0.38
SKA3-204ENST00000462482 OR8D4Q8NGM9 314 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 OR6N2Q8NGY6 317 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 H1FXQ92522 213 aaKnown RBP12.69□□□□□ -0.38
SKA3-204ENST00000462482 OTULINQ96BN8 352 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 PGAM5Q96HS1 289 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 INTS14Q96SY0 518 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 RBM4BQ9BQ04 359 aaKnown RBP12.69□□□□□ -0.38
SKA3-204ENST00000462482 RGCCQ9H4X1 137 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 PKD1L1Q8TDX9 2849 aa12.69□□□□□ -0.38
SKA3-204ENST00000462482 CDIPTO14735 213 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 SNX3O60493 162 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 CLPXO76031 633 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 H2BFMP0C1H6 154 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 PAICSP22234 425 aaKnown RBP12.68□□□□□ -0.38
SKA3-204ENST00000462482 GSTT1P30711 240 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 GSK3AP49840 483 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 MNAT1P51948 309 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 CSNK2BP67870 215 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 BLMHQ13867 455 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 METAP1DQ6UB28 335 aaPredicted RBP12.68□□□□□ -0.38
SKA3-204ENST00000462482 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 CYP2R1Q6VVX0 501 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 KCTD8Q6ZWB6 473 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 DEFB107AQ8IZN7 70 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 GALNT4Q8N4A0 578 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 FAM216BQ8N7L0 139 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 LY6G5BQ8NDX9 201 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 TEX47Q8TBZ9 253 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 SGK3Q96BR1 496 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 MED30Q96HR3 178 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 HIST1H2AAQ96QV6 131 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 NMNAT2Q9BZQ4 307 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 REEP1Q9H902 201 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 BRD7Q9NPI1 651 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 SAMHD1Q9Y3Z3 626 aaKnown RBP12.68□□□□□ -0.38
SKA3-204ENST00000462482 MPC1Q9Y5U8 109 aa12.68□□□□□ -0.38
SKA3-204ENST00000462482 hCG_38984A0A1B0GV85 526 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ANKRD61A6NGH8 418 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 SLC22A31A6NKX4 558 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ACOT8O14734 319 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 SOX14O95416 240 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 PSKH1P11801 424 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 POU1F1P28069 291 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 TGFBR2P37173 567 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ZNF121P58317 390 aaPredicted RBP12.67□□□□□ -0.38
SKA3-204ENST00000462482 GMFBP60983 142 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 MICAQ29983 383 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 RHOUQ7L0Q8 258 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 C11orf53Q8IXP5 236 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
SKA3-204ENST00000462482 PAPD5Q8NDF8 572 aaKnown RBP12.67□□□□□ -0.38
SKA3-204ENST00000462482 OR10Z1Q8NGY1 313 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 OR5R1Q8NH85 324 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ABHD6Q9BV23 337 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 DNTTIP1Q9H147 329 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ARMC1Q9NVT9 282 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 HAO2Q9NYQ3 351 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 ACTR3BQ9P1U1 418 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 VPREB3Q9UKI3 123 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 RHBDD3Q9Y3P4 386 aa12.67□□□□□ -0.38
SKA3-204ENST00000462482 A0A0G2JK05 382 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 A0A1W2PQ09 198 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 TMEM210A6NLX4 147 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 H3BN98 237 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 NPFFO15130 113 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 DCTN3O75935 186 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 CLUP10909 449 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 ANOS1P23352 680 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 PROK1P58294 105 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 C2orf68Q2NKX9 166 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 FAM98BQ52LJ0 330 aaKnown RBP12.66□□□□□ -0.38
SKA3-204ENST00000462482 ATPAF1Q5TC12 328 aaPredicted RBP12.66□□□□□ -0.38
SKA3-204ENST00000462482 NCR3LG1Q68D85 454 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 ZNF770Q6IQ21 691 aaPredicted RBP12.66□□□□□ -0.38
SKA3-204ENST00000462482 WDR86Q86TI4 376 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 OR4Q3Q8NH05 313 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 PKP2Q99959 881 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 DCTN5Q9BTE1 182 aa12.66□□□□□ -0.38
SKA3-204ENST00000462482 DGCR6LQ9BY27 220 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms