RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 OR10K1Q8NGX5 313 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 FAM46BQ96A09 425 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 C5orf34Q96MH7 638 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 NKX3-1Q99801 234 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 MS4A7Q9GZW8 240 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 COMMD9Q9P000 198 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 DKKL1Q9UK85 242 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 NOP16Q9Y3C1 178 aaKnown RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 TRBV6-7A0A0A0MS04 114 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 C9orf170A2RU37 121 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF814B7Z6K7 855 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 CBR3O75828 277 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 CNR1P21554 472 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 ITGA3P26006 1051 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 POU3F1Q03052 451 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-204ENST00000461897 AIMP2Q13155 320 aaKnown RBP10.97□□□□□ -0.65
COL4A6-204ENST00000461897 UNC119Q13432 240 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM176BQ3YBM2 270 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM17Q86X19 198 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 SLC22A24Q8N4F4 322 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 IP6K3Q96PC2 410 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 CNTD2Q9H8S5 307 aa10.97□□□□□ -0.65
COL4A6-204ENST00000461897 CNTRLQ7Z7A1 2325 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 DBX1A6NMT0 343 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 CEACAM18A8MTB9 384 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM14DPA8MWL7 114 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 SULT2B1O00204 365 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 NEURL1O76050 574 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 FCER2P06734 321 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 CEACAM1P13688 526 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF17P17021 662 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 CXADRP78310 365 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 HSF1Q00613 529 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 PPP1R1AQ13522 171 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 PAN3Q58A45 887 aaKnown RBP10.96□□□□□ -0.65
COL4A6-204ENST00000461897 OR10K2Q6IF99 312 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 TRAPPC6BQ86SZ2 158 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 RELL2Q8NC24 303 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-204ENST00000461897 ADPRHL1Q8NDY3 354 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 OR1M1Q8NGA1 313 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 STOML3Q8TAV4 291 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 PPP1R1CQ8WVI7 109 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 PHB2Q99623 299 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 VRK1Q99986 396 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-204ENST00000461897 CST11Q9H112 138 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 MED29Q9NX70 200 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 LRFN1Q9P244 771 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 SLC5A6Q9Y289 635 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 HDGFL3Q9Y3E1 203 aa10.96□□□□□ -0.65
COL4A6-204ENST00000461897 CUL9Q8IWT3 2517 aa10.96□□□□□ -0.66
COL4A6-204ENST00000461897 RAB19A4D1S5 217 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 PINLYPA6NC86 204 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 NPIPA5E9PKD4 350 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 DNASE2O00115 360 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 P2RY10O00398 339 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 EFSO43281 561 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 LMX1BO60663 402 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 DUS4LO95620 317 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 TTRP02766 147 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 H2BFMP0C1H6 154 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 RFPL3SP0C7P2 107 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 NAT1P18440 290 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 KLK2P20151 261 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 FKBP2P26885 142 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 NOVA1P51513 510 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 B3GALT5-AS1P59052 145 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 PPIAP62937 165 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 SRSF6Q13247 344 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 CDNFQ49AH0 187 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 SCGB2B2Q4G0G5 96 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 ABHD17BQ5VST6 288 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 SPINK14Q6IE38 97 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 IGF2-ASQ6U949 168 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 C17orf107Q6ZR85 190 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 OR2W3Q7Z3T1 314 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 ACBD4Q8NC06 268 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 OR4S1Q8NGB4 309 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 FER1L6-AS2Q96M78 137 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 SIGLEC12Q96PQ1 595 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 PIGMQ9H3S5 423 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 NPIPA1Q9UND3 350 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 DCHS1Q96JQ0 3298 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 FRYQ5TBA9 3013 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 KIAA1549Q9HCM3 1950 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 IGKV1D-43A0A0B4J1Z2 117 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 F8VVB4 439 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 F8VWA3 439 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 ABCD4O14678 606 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 RAMP1O60894 148 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 CHRM2P08172 466 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 SRD5A2P31213 254 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 CASRP41180 1078 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 LUMP51884 338 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 TAS2R31P59538 309 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 FMODQ06828 376 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms