RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 BTBD17A6NE02 478 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 P2RY10O00398 339 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 PRODHO43272 600 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 NDUFB3O43676 98 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 TOX4O94842 621 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 GYPAP02724 150 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 CD80P33681 288 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 ZNF121P58317 390 aaPredicted RBP7.41□□□□□ -1.22
LDB1-203ENST00000461873 DBPQ10586 325 aaPredicted RBP7.41□□□□□ -1.22
LDB1-203ENST00000461873 RIPK1Q13546 671 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 PDCD1Q15116 288 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 MPPED2Q15777 294 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 LRRC36Q1X8D7 754 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 RSPO1Q2MKA7 263 aaPredicted RBP7.41□□□□□ -1.22
LDB1-203ENST00000461873 LRRC10Q5BKY1 277 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 SLC35D3Q5M8T2 416 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 LPCAT4Q643R3 524 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 LYPD4Q6UWN0 246 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 DOK3Q7L591 496 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 OR10S1Q8NGN2 331 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 LRRC29Q8WV35 223 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 GATAD2BQ8WXI9 593 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 PIGCQ92535 297 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 DVL3Q92997 716 aaPredicted RBP7.41□□□□□ -1.22
LDB1-203ENST00000461873 DUX5Q96PT3 197 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 DCLRE1BQ9H816 532 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 MED20Q9H944 212 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 RNPEPL1Q9HAU8 725 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 TVP23BQ9NYZ1 205 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 DNAJB9Q9UBS3 223 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 ENOPH1Q9UHY7 261 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 GTF2A1LQ9UNN4 478 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 FAM96BQ9Y3D0 163 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 MPC1Q9Y5U8 109 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 TMEM14AQ9Y6G1 99 aa7.41□□□□□ -1.22
LDB1-203ENST00000461873 DNAJC9-AS1A6NH13 148 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 TMEM210A6NLX4 147 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 MTRF1O75570 445 aaKnown RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 MUC1P15941 1255 aaPredicted RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 OTX1P32242 354 aaPredicted RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 PMELP40967 661 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 MAP2K3P46734 347 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 COMPP49747 757 aaPredicted RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 GSK3AP49840 483 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 GMFBP60983 142 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 FGF12P61328 243 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 IL13RA1P78552 427 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 FAM3AP98173 230 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 HNRNPA0Q13151 305 aaKnown RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 BLMHQ13867 455 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 PCK2Q16822 640 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 ZNF829Q3KNS6 432 aaPredicted RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 AWAT1Q58HT5 328 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 LYPD2Q6UXB3 125 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 CPOQ8IVL8 374 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 ZDHHC22Q8N966 263 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 OTOSQ8NHW6 89 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 TBC1D15Q8TC07 691 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 RNF133Q8WVZ7 376 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 ZNRF4Q8WWF5 429 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 NRG4Q8WWG1 115 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 SGK3Q96BR1 496 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 UPRTQ96BW1 309 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 DUS3LQ96G46 650 aaKnown RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 RNF170Q96K19 258 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 FAM71F1Q96KD3 344 aaPredicted RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 DDOQ99489 341 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 NMNAT2Q9BZQ4 307 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 PAPOLBQ9NRJ5 636 aaKnown RBP7.4□□□□□ -1.22
LDB1-203ENST00000461873 TNFRSF19Q9NS68 423 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 KRT84Q9NSB2 600 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 IKZF2Q9UKS7 526 aa7.4□□□□□ -1.22
LDB1-203ENST00000461873 TMEM269A0A1B0GVZ9 245 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 A0A1B0GWJ7 208 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 SAC3D1A6NKF1 404 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZNF850A8MQ14 1090 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZNF879B4DU55 563 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 GPR37O15354 613 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 IGHV4-38-2P0DP08 117 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 HKR1P10072 659 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 EEF1B2P24534 225 aaKnown RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 ATP6V1E1P36543 226 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 RBMXP38159 391 aaKnown RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 RIDAP52758 137 aaKnown RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 ESRRGP62508 458 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 SLC34A1Q06495 639 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 APOFQ13790 326 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZNF362Q5T0B9 420 aaPredicted RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZFP1Q6P2D0 407 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 C17orf107Q6ZR85 190 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 BTN2A1Q7KYR7 527 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZDHHC23Q8IYP9 409 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 BCL6BQ8N143 479 aaPredicted RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 PQLC1Q8N2U9 271 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 OR1M1Q8NGA1 313 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ZNF671Q8TAW3 534 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ASB17Q8WXJ9 295 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms