RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SPSB4Q96A44 273 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 PKP2Q99959 881 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 CADM1Q9BY67 442 aaKnown RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 ZNF556Q9HAH1 456 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 SMURF1Q9HCE7 757 aa13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 PDP1Q9P0J1 537 aaPredicted RBP13.07□□□□□ -0.32
CHCHD3-204ENST00000457942 ANXA2P2A6NMY6 339 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 P2RY10O00398 339 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 ACOT8O14734 319 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 LIPFP07098 398 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 FLOT2Q14254 428 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 MICBQ29980 383 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 PLBD1Q6P4A8 553 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 CD300LDQ6UXZ3 194 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 SPATA24Q86W54 205 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 FAM90A1Q86YD7 464 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 THEM6Q8WUY1 208 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 SGK3Q96BR1 496 aa13.06□□□□□ -0.32
CHCHD3-204ENST00000457942 hCG_38984A0A1B0GV85 526 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 ARRDC5A6NEK1 342 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 DVL1O14640 695 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 SELENOFO60613 162 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 TIPRLO75663 272 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 CRYBA1P05813 215 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 LYNP07948 512 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 NAA10P41227 235 aaPredicted RBP13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 GSK3AP49840 483 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 BPIFB3P59826 476 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 GMFBP60983 142 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 CSNK2BP67870 215 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 GINS1Q14691 196 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 SNCBQ16143 134 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 C16orf87Q6PH81 154 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 ADGRG5Q8IZF4 528 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 CSNK2A3Q8NEV1 391 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 CANT1Q8WVQ1 401 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 GATAD2BQ8WXI9 593 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 WDFY2Q96P53 400 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 AMELYQ99218 206 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
CHCHD3-204ENST00000457942 SRRM5B3KS81 715 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 GSC2O15499 205 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 OPRL1P41146 370 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 ARF6P62330 175 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 CBX1P83916 185 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 IL5RAQ01344 420 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 TEX36Q5VZQ5 186 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 WDR86Q86TI4 376 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 TIGD4Q8IY51 512 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 LHX4Q969G2 390 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 TMIGD2Q96BF3 282 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 TBX15Q96SF7 602 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 CCL13Q99616 98 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 RTL8AQ9BWD3 113 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 RGCCQ9H4X1 137 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 RNPEPL1Q9HAU8 725 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 ONECUT1Q9UBC0 465 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 POMPQ9Y244 141 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 RHBDD3Q9Y3P4 386 aa13.04□□□□□ -0.32
CHCHD3-204ENST00000457942 NBEAL2Q6ZNJ1 2754 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 AQP12BA6NM10 295 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 CDIPTO14735 213 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 LHBP01229 141 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 HMGN1P05114 100 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 MUC1P15941 1255 aaPredicted RBP13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 PDCD1Q15116 288 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 WDR38Q5JTN6 314 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 FIP1L1Q6UN15 594 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 WDR82Q6UXN9 313 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 SLC36A1Q7Z2H8 476 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 TMEM179BQ7Z7N9 219 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 AQP12AQ8IXF9 295 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 FAM81AQ8TBF8 368 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 YY1AP1Q9H869 796 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 NOX4Q9NPH5 578 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 DNAJB11Q9UBS4 358 aa13.03□□□□□ -0.32
CHCHD3-204ENST00000457942 CENPVL3A0A0U1RRI6 287 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 FAM181BA6NEQ2 426 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 NKX6-3A6NJ46 265 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 POM121CA8CG34 1229 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 ZNF850A8MQ14 1090 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 PRODHO43272 600 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 NDUFB3O43676 98 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 OSMP13725 252 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 MMP9P14780 707 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 PRDX4Q13162 271 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 IKZF1Q13422 519 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms