RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 LDLRAD3Q86YD5 345 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 ERI1Q8IV48 349 aaKnown RBP13.19□□□□□ -0.3
GPC1-206ENST00000455111 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 TMEM86BQ8N661 226 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 OR5T2Q8NGG2 359 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 LINC01006Q8NI28 216 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 HPSE2Q8WWQ2 592 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 TNFRSF14Q92956 283 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 MAGIXQ9H6Y5 334 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 RNPEPL1Q9HAU8 725 aa13.19□□□□□ -0.3
GPC1-206ENST00000455111 PRR32B1ATL7 298 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 B2RBV5 119 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 RNASEK-C17orf49H0YIS7 233 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 NDUFA2O43678 99 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 GPR137BO60478 399 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 SELENOFO60613 162 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 LIPFP07098 398 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 ANXA2P07355 339 aaKnown RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 GRB2P62993 217 aaKnown RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 MXRA7P84157 204 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 KLRD1Q13241 179 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 METTL11BQ5VVY1 283 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 ASPHD2Q6ICH7 369 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 PNKDQ8N490 385 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 PNLDC1Q8NA58 520 aaKnown RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 GATAD2BQ8WXI9 593 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 INTS14Q96SY0 518 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 FEVQ99581 238 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 CNTD2Q9H8S5 307 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 BRD7Q9NPI1 651 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 BAIAP2Q9UQB8 552 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
GPC1-206ENST00000455111 POMT1Q9Y6A1 747 aa13.18□□□□□ -0.3
GPC1-206ENST00000455111 TGP01266 2768 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 CLPSL1A2RUU4 121 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 ANKRD30BLA7E2S9 258 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 GLCEO94923 617 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 KNG1P01042 644 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 GSTT1P30711 240 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 DCTDP32321 178 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 GRK5P34947 590 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 DDOSTP39656 456 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 PROK1P58294 105 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 TRIM25Q14258 630 aaKnown RBP13.17□□□□□ -0.3
GPC1-206ENST00000455111 PDCD1Q15116 288 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 TAF13Q15543 124 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 KCNJ8Q15842 424 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 DGUOKQ16854 277 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 TIGD6Q17RP2 521 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 CDONQ4KMG0 1287 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 Q6ZSV7 163 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 ADGRG5Q8IZF4 528 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 BBS1Q8NFJ9 593 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 RPL3LQ92901 407 aaKnown RBP13.17□□□□□ -0.3
GPC1-206ENST00000455111 GAFA1Q96PS6 74 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 TOR3AQ9H497 397 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 SIRT7Q9NRC8 400 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 C14orf119Q9NWQ9 140 aa13.17□□□□□ -0.3
GPC1-206ENST00000455111 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
GPC1-206ENST00000455111 HCCSP53701 268 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 OCLNQ16625 522 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 FAM76BQ5HYJ3 339 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 ATPAF1Q5TC12 328 aaPredicted RBP13.16□□□□□ -0.3
GPC1-206ENST00000455111 HCP5Q6MZN7 132 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 DHFR2Q86XF0 187 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 OR8S1Q8NH09 359 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 OR4F5Q8NH21 305 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 AJUBAQ96IF1 538 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
GPC1-206ENST00000455111 DCTN5Q9BTE1 182 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 REEP1Q9H902 201 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 BEX1Q9HBH7 125 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 TRIM36Q9NQ86 728 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 DNAJB11Q9UBS4 358 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 PRPF19Q9UMS4 504 aaKnown RBP13.16□□□□□ -0.3
GPC1-206ENST00000455111 KPTNQ9Y664 436 aa13.16□□□□□ -0.3
GPC1-206ENST00000455111 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
GPC1-206ENST00000455111 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 ZNF850A8MQ14 1090 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 RHBDL1O75783 438 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 CLPXO76031 633 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 ECDO95905 644 aaPredicted RBP13.15□□□□□ -0.3
GPC1-206ENST00000455111 SLC2A5P22732 501 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 HSD11B1P28845 292 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms