RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 POM121Q96HA1 1249 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 ADI1Q9BV57 179 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 JAM3Q9BX67 310 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 FGF23Q9GZV9 251 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-205ENST00000454542 TLNRD1Q9H1K6 362 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 PPP1R3EQ9H7J1 279 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 ABCB9Q9NP78 766 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 GPR84Q9NQS5 396 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 RHBDD3Q9Y3P4 386 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 PCDHGB1Q9Y5G3 927 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 MPC1Q9Y5U8 109 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 SNX5Q9Y5X3 404 aa11.91□□□□□ -0.5
HDAC4-205ENST00000454542 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF816-ZNF321PA0A0X1KG74 233 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 DHRS7CA6NNS2 312 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 B4DSR2 109 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 CRLF1O75462 422 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 CYB5R3P00387 301 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 MDH2P40926 338 aaKnown RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 DVL1P1P54792 670 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 RAB40BQ12829 278 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 IL18R1Q13478 541 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 BCL2L15Q5TBC7 163 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 FDX2Q6P4F2 183 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 PEG10Q86TG7 708 aaKnown RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 LRRC28Q86X40 367 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 C1orf87Q8N0U7 546 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 MUC20Q8N307 709 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 SPICQ8N5J4 248 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 YIPF7Q8N8F6 280 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 OR51E1Q8TCB6 317 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 PPP1R14AQ96A00 147 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 GAL3ST1Q99999 423 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 PAPOLGQ9BWT3 736 aaKnown RBP11.9□□□□□ -0.5
HDAC4-205ENST00000454542 RNPEPL1Q9HAU8 725 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 V9GYS6 101 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 CUBNO60494 3623 aa11.9□□□□□ -0.5
HDAC4-205ENST00000454542 IGHV3-64DA0A0J9YX35 117 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 LRRC30A6NM36 301 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 A8MXK9 166 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 H0YAE9 185 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 LMX1BO60663 402 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 CLIC3O95833 236 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 MSMBP08118 114 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 CAPGP40121 348 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 MAP2K3P46734 347 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 IL5RAQ01344 420 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 SLC34A1Q06495 639 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 ZNF154Q13106 437 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 PRDX4Q13162 271 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 TP53I3Q53FA7 332 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 WDR38Q5JTN6 314 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 TMEM42Q69YG0 159 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 FAM220AQ7Z4H9 259 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 C11orf53Q8IXP5 236 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 PRSS35Q8N3Z0 413 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 DHRSXQ8N5I4 330 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 ACBD7Q8N6N7 88 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 SETD9Q8NE22 299 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 FBLIM1Q8WUP2 373 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 OR5P3Q8WZ94 311 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 FN3KRPQ9HA64 309 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
HDAC4-205ENST00000454542 INPP5EQ9NRR6 644 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 C14orf119Q9NWQ9 140 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 MYRFQ9Y2G1 1151 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 HSPE1-MOB4S4R3N1 261 aa11.89□□□□□ -0.51
HDAC4-205ENST00000454542 NIPBLQ6KC79 2804 aaeCLIP11.89□□□□□ -0.51
HDAC4-205ENST00000454542 ISPDA4D126 451 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 TMEM210A6NLX4 147 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 CEACAM18A8MTB9 384 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 CPT2P23786 658 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 GNALP38405 381 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 ACTA2P62736 377 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 ACTG2P63267 376 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 SMN1Q16637 294 aaKnown RBP11.88□□□□□ -0.51
HDAC4-205ENST00000454542 KCTD20Q7Z5Y7 419 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 ZDHHC23Q8IYP9 409 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 SYS1Q8N2H4 156 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 SEMA6DQ8NFY4 1073 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 OR1M1Q8NGA1 313 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 OR52I1Q8NGK6 324 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 OR11L1Q8NGX0 322 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 OR14K1Q8NGZ2 314 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 OR8S1Q8NH09 359 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 OR51F2Q8NH61 342 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 CNIH3Q8TBE1 160 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 NRG4Q8WWG1 115 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 CYGBQ8WWM9 190 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 FAM71F1Q96KD3 344 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms