RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 C12orf54Q6X4T0 127 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 PLEKHG7Q6ZR37 379 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 PRSS45Q7RTY3 260 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 FGFRL1Q8N441 504 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 OR1M1Q8NGA1 313 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 OR52H1Q8NGJ2 320 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DNAJC9Q8WXX5 260 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 ST8SIA4Q92187 359 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 PIGCQ92535 297 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 ERGIC1Q969X5 290 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 SEH1LQ96EE3 360 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 NRBF2Q96F24 287 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 LYZL4Q96KX0 146 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 IL4I1Q96RQ9 567 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 CNN2Q99439 309 aaKnown RBP8.07□□□□□ -1.12
USP54-207ENST00000451492 TBX5Q99593 518 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 PCGF1Q9BSM1 259 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 PRRG3Q9BZD7 231 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 MS4A7Q9GZW8 240 aaPredicted RBP8.07□□□□□ -1.12
USP54-207ENST00000451492 RIBC2Q9H4K1 309 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 NIPAL2Q9H841 368 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 SMURF1Q9HCE7 757 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4Q9UBX2 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 NUP50Q9UKX7 468 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 AP4S1Q9Y587 144 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 SOX21Q9Y651 276 aaPredicted RBP8.07□□□□□ -1.12
USP54-207ENST00000451492 A0A0A6YYJ9 748 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 TRAV38-1A0A0B4J264 116 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 TMEM269A0A1B0GVZ9 245 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 ANXA2P2A6NMY6 339 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 PRR32B1ATL7 298 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 C22orf46C9J442 243 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 H3BSH0 61 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 CDIPTO14735 213 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 PHYHO14832 338 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 MAGEB4O15481 346 aaPredicted RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 ATP5HO75947 161 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 APOL3O95236 402 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 CFL1P23528 166 aaKnown RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 FPR2P25090 351 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 DDOSTP39656 456 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 CXCR4P61073 352 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 FGF12P61328 243 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 ESRRGP62508 458 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 MFGE8Q08431 387 aaPredicted RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 CEP78Q5JTW2 689 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 RUSC1-AS1Q66K80 236 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 KCTD18Q6PI47 426 aaPredicted RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 RBMS3Q6XE24 437 aaKnown RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 BRD3OSQ6XYD6 125 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 ZNF841Q6ZN19 808 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 FAM90A1Q86YD7 464 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 ZDHHC13Q8IUH4 622 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 SLC35F2Q8IXU6 374 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 SPERTQ8NA61 448 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 CSNK2A3Q8NEV1 391 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 PYDC1Q8WXC3 89 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 RAB40AQ8WXH6 277 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 RPL3LQ92901 407 aaKnown RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 FAM71F1Q96KD3 344 aaPredicted RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 TEAD3Q99594 435 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 CIB1Q99828 191 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 PKP2Q99959 881 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 MICU1Q9BPX6 476 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 RTL8AQ9BWD3 113 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 YIPF3Q9GZM5 350 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 TNFRSF19Q9NS68 423 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 SNTG1Q9NSN8 517 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 H2AFY2Q9P0M6 372 aaPredicted RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 ERVK-18Q9QC07 812 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 OAZ3Q9UMX2 235 aa8.06□□□□□ -1.12
USP54-207ENST00000451492 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
USP54-207ENST00000451492 DNAJC9-AS1A6NH13 148 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 ZAR1LA6NP61 321 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 TMPRSS2O15393 492 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 AKR7A2O43488 359 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 SFTPBP07988 381 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 FCGR1AP12314 374 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 ALOX5APP20292 161 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 GPM6AP51674 278 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 RIDAP52758 137 aaKnown RBP8.05□□□□□ -1.12
USP54-207ENST00000451492 PAX2Q02962 417 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 PAX8Q06710 450 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 IKZF1Q13422 519 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 KCNJ8Q15842 424 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 ODF4Q2M2E3 257 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 SLX4IPQ5VYV7 408 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 C12orf73Q69YU5 71 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 KDM4DQ6B0I6 523 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 WDR82Q6UXN9 313 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 PDZD9Q8IXQ8 264 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 ZDHHC23Q8IYP9 409 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 FTMTQ8N4E7 242 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 FAM216BQ8N7L0 139 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 ZDHHC22Q8N966 263 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 OR5T2Q8NGG2 359 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 OR51G2Q8NGK0 314 aa8.05□□□□□ -1.12
USP54-207ENST00000451492 TMEM163Q8TC26 289 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms