RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 GATAD2BQ8WXI9 593 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 ZNF799Q96GE5 643 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 POM121L2Q96KW2 1035 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 MGLLQ99685 303 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 BEX2Q9BXY8 128 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 TRIM36Q9NQ86 728 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 BABAM2Q9NXR7 383 aa14.53□□□□□ -0.08
PRPF40A-204ENST00000450303 TMEM269A0A1B0GVZ9 245 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 ACOD1A6NK06 481 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 MAGEB4O15481 346 aaPredicted RBP14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 NCR1O76036 304 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 RPP14O95059 124 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF250P15622 560 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 LIPAP38571 399 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 WNT5AP41221 380 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 CX3CR1P49238 355 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 KLF3P57682 345 aaPredicted RBP14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 SELENOVP59797 346 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 LSM3P62310 102 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 SPHARQ15513 63 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 SPATA46Q5T0L3 261 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 FAM166AQ6J272 317 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF101Q8IZC7 436 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 NDNFQ8TB73 568 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 GTF3AQ92664 365 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 YIPF5Q969M3 257 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 BCL2L14Q9BZR8 327 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 SHARPINQ9H0F6 387 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 DCSTAMPQ9H295 470 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 MOB1AQ9H8S9 216 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 ISG20L2Q9H9L3 353 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 CDC42EP3Q9UKI2 254 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 KCNS2Q9ULS6 477 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 GRIP1Q9Y3R0 1128 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 R4GMQ9 66 aa14.52□□□□□ -0.09
PRPF40A-204ENST00000450303 IGLV3-9A0A075B6K5 115 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 PRR32B1ATL7 298 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 CLDN25C9JDP6 229 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 LOC110117498-PIK3R3F6TDL0 507 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 ABHD16AO95870 558 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 ANXA2P07355 339 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 ACSM4P0C7M7 580 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 GADD45AP24522 165 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 OTX1P32242 354 aaPredicted RBP14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 MMP16P51512 607 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 PSMA6P60900 246 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 TSTQ16762 297 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 KRTAP27-1Q3LI81 207 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 CCDC58Q4VC31 144 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 GDPGP1Q6ZNW5 385 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 KLBQ86Z14 1044 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 C1orf174Q8IYL3 243 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 DYNC2LI1Q8TCX1 351 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 SLC7A6Q92536 515 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 RDH5Q92781 318 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 PELI1Q96FA3 418 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 C4orf45Q96LM5 186 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 NARFLQ9H6Q4 476 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 ISYNA1Q9NPH2 558 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 ACOXLQ9NUZ1 547 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 CCDC59Q9P031 241 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 GTF2A1LQ9UNN4 478 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 A3GALT2U3KPV4 340 aa14.51□□□□□ -0.09
PRPF40A-204ENST00000450303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.5□□□□□ -0.092e-17■■■■■ 115.9
PRPF40A-204ENST00000450303 C17orf100A8MU93 164 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 J3QW42 95 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 CDC14BO60729 498 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 IFNA2P01563 188 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 LCATP04180 440 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 DBHP09172 617 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 SOX6P35712 828 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 MPV17P39210 176 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 TGM4P49221 684 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF121P58317 390 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 NCS1P62166 190 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 CCL8P80075 99 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 BDH1Q02338 343 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 ACSM1Q08AH1 577 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 FDX2Q6P4F2 183 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 RPL22L1Q6P5R6 122 aaKnown RBP14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 OR5L1Q8NGL2 311 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 SLC25A40Q8TBP6 338 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 APOBEC3DQ96AK3 386 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 PGAM5Q96HS1 289 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 OR10A2Q9H208 303 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 MMP27Q9H306 513 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 BRD7Q9NPI1 651 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF275Q9NSD4 429 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 TMEM160Q9NX00 188 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 GPR160Q9UJ42 338 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 N6AMT1Q9Y5N5 214 aa14.5□□□□□ -0.09
PRPF40A-204ENST00000450303 LOC100506127A0A0U1RQW1 187 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 NGFP01138 241 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 FAM157CP0CG43 387 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 TUBG1P23258 451 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 PSMB10P40306 273 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 GPR6P46095 362 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 MLLT11Q13015 90 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 ALKBH1Q13686 389 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 RSPO1Q2MKA7 263 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms