RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 Q6ZT83 130 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 DCXRQ7Z4W1 244 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPR141Q7Z602 305 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPR148Q8TDV2 347 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 METTL9Q9H1A3 318 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC23A1Q9UHI7 598 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 EMCNQ9ULC0 261 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 LRRK1Q38SD2 2015 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 RPS10-NUDT3A0A1W2PQS6 291 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 MPIG6BO95866 241 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NUDT3O95989 172 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 HLA-DPB1P04440 258 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CCL2P13500 99 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 Q56UQ5 140 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SOHLH1Q5JUK2 328 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 COX20Q5RI15 118 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TSPO2Q5TGU0 170 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 APCDD1LQ8NCL9 501 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 GRAMD2BQ96HH9 432 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 C12orf10Q9HB07 376 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SPACA1Q9HBV2 294 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 MGAT4CQ9UBM8 478 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 KCNIP3Q9Y2W7 256 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NPTNQ9Y639 398 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 IGKV1-8A0A0C4DH67 115 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 GYPBP06028 91 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC2A1P11166 492 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 FRKP42685 505 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 EFNA4P52798 201 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CLIP4Q8N3C7 705 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CCDC107Q8WV48 283 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM231Q9H6L2 316 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 MAGIXQ9H6Y5 334 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 EI24O14681 340 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PSCAO43653 123 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NEURL1O76050 574 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 GAAP10253 952 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NPY1RP25929 384 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 DLX5P56178 289 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SWI5Q1ZZU3 235 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PGGHGQ32M88 737 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 Q8NFD4 153 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR5AK2Q8NH90 309 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PTP4A1Q93096 173 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC7A6OSQ96CW6 309 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NEIL1Q96FI4 390 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 RGCCQ9H4X1 137 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PARP11Q9NR21 331 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SEMA5BQ9P283 1151 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 RNF7Q9UBF6 113 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TNRC6AQ8NDV7 1962 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 A0A087WXM4 84 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 LRP5LA4QPB2 252 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CELA3AP09093 270 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A8P0DMV1 189 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A9P0DMV2 189 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPX2P18283 190 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 IL12AP29459 219 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PTH2RP49190 550 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CT45A2Q5DJT8 189 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NCCRP1Q6ZVX7 275 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZDHHC23Q8IYP9 409 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 FAM71CQ8NEG0 241 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 ARMC1Q9NVT9 282 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NPAP1Q9NZP6 1156 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SORL1Q92673 2214 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF724A8MTY0 619 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CRYZL1O95825 349 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TAB1Q15750 504 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC16A13Q7RTY0 426 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 KCTD20Q7Z5Y7 419 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SAT2Q96F10 170 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 GPR35Q9HC97 309 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 NOTCH4Q99466 2003 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TRAV40A0A0B4J280 105 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 AQP7P3A6NL99 342 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CBR1P16152 277 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRPH2P23942 346 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CX3CR1P49238 355 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 PLPPR5Q32ZL2 321 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC22A6Q4U2R8 563 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 HAGHLQ6PII5 290 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 COMTD1Q86VU5 262 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SGMS2Q8NHU3 365 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM255BQ8WV15 326 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 S100ZQ8WXG8 99 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 CMBLQ96DG6 245 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SCGB3A2Q96PL1 93 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC38A1Q9H2H9 487 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF835Q9Y2P0 537 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 U3KQA8 63 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 KIAA1671Q9BY89 1806 aa4.95□□□□□ -1.62
CDC42BPA-209ENST00000448940 TEX13DA0A0J9YY54 714 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 RFPL3SP0C7P2 107 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR5H8P0DN80 308 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 SDHAP31040 664 aa4.94□□□□□ -1.62
CDC42BPA-209ENST00000448940 TGFBR2P37173 567 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms