RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ZNF26P17031 533 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-202ENST00000448238 CLDN12P56749 244 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 RELQ04864 619 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-202ENST00000448238 SHBQ15464 509 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 BSXQ3C1V8 233 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 TXNDC8Q6A555 127 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 TRAT1Q6PIZ9 186 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 Q8IYB0 196 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 BANF2Q9H503 90 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 ARHGAP32A7KAX9 2087 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 MYOFQ9NZM1 2061 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 PTPRMP28827 1452 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 OR2G6Q5TZ20 316 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 RAB1CQ92928 201 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 MAP6Q96JE9 813 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 CLEC5AQ9NY25 188 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 SLCO3A1Q9UIG8 710 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 CLN3Q13286 438 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 HERPUD1Q15011 391 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-202ENST00000448238 A0A1W2PP55 124 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 C1QTNF9BB2RNN3 333 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 LGALS3P17931 250 aaKnown RBP8.14□□□□□ -1.11
NIPBL-202ENST00000448238 LMO2P25791 158 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 LGALS7P47929 136 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 PMP22Q01453 160 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 SLC36A1Q7Z2H8 476 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 MOGAT3Q86VF5 341 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 TEX29Q8N6K0 151 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 MRGPRX2Q96LB1 330 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 NMNAT3Q96T66 252 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 TXNIPQ9H3M7 391 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 MASP2O00187 686 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 HMGN2P05204 90 aaKnown RBP8.14□□□□□ -1.11
NIPBL-202ENST00000448238 IAPPP10997 89 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 ACVRL1P37023 503 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 PIGAP37287 484 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 FLT3LGP49771 235 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 PSMG4Q5JS54 123 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 ILDR1Q86SU0 546 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-202ENST00000448238 LRRC15Q8TF66 581 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 OIT3Q8WWZ8 545 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 KMT2EQ8IZD2 1858 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 ONECUT2O95948 504 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 F13BP05160 661 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 LRRC29Q8WV35 223 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 SLC17A9Q9BYT1 436 aa8.14□□□□□ -1.11
NIPBL-202ENST00000448238 A0A1W2PQU0 124 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 NR0B2Q15466 257 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 PLPPR5Q32ZL2 321 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 LY6G5CQ5SRR4 150 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 PRSS42Q7Z5A4 293 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 FUNDC1Q8IVP5 155 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 PHLDA1Q8WV24 401 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 GATA6Q92908 595 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 SAP30LQ9HAJ7 183 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 PLSCR3Q9NRY6 295 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 IL20Q9NYY1 176 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF346Q9UL40 294 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 APCSP02743 223 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 ZNF735P0CB33 412 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 CEACAM7Q14002 265 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 FAHD2BQ6P2I3 314 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 NUFIP2Q7Z417 695 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 MEX3DQ86XN8 651 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 OR52N4Q8NGI2 321 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 DIMT1Q9UNQ2 313 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 IGLON5A6NGN9 336 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 THBS4P35443 961 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 ASCL1P50553 236 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 AGBL5Q8NDL9 886 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 TFAP2BQ92481 460 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 CPEB1Q9BZB8 566 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 PEF1Q9UBV8 284 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 A0A0B4J293 547 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 TCRBV7S3A2A0A539 114 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 COL19A1Q14993 1142 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 KHDC3LQ587J8 217 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 UBTD2Q8WUN7 234 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 DTD2Q96FN9 168 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 TET3O43151 1660 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 MOSPD3O75425 235 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 FCGR3AP08637 254 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 CEACAM3P40198 252 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 OR4C13Q8NGP0 309 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 SNRNP40Q96DI7 357 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 SMG9Q9H0W8 520 aaKnown RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 CALHM2Q9HA72 323 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 COX11Q9Y6N1 276 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 GPR75O95800 540 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 KLF3P57682 345 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-202ENST00000448238 EGR3Q06889 387 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 SMUG1Q53HV7 270 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 ASCL4Q6XD76 172 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 LIPIQ6XZB0 460 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 RNF133Q8WVZ7 376 aa8.13□□□□□ -1.11
NIPBL-202ENST00000448238 TMEM140Q9NV12 185 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms