RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 AMY2BP19961 511 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 CAV2P51636 162 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 GABREP78334 506 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF528Q3MIS6 628 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 COMMD2Q86X83 199 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 UEVLDQ8IX04 471 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 NFAM1Q8NET5 270 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-204ENST00000447182 ZFP57Q9NU63 452 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF319Q9P2F9 582 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 HCKP08631 526 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 TAS2R46P59540 309 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 MYBPHQ13203 477 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 DOK3Q7L591 496 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 NRIP2Q9BQI9 281 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 OR10A2Q9H208 303 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 SEC61A2Q9H9S3 476 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 PNRC2Q9NPJ4 139 aaKnown RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 RCC2Q9P258 522 aaKnown RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 ATXN7L1Q9ULK2 861 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 A0A1W2PP11 408 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF98A6NK75 572 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 FOXI3A8MTJ6 420 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 METTL12A8MUP2 240 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 MTRF1O75570 445 aaKnown RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 CRTAPO75718 401 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 MSX1P28360 303 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 NPBWR1P48145 328 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 P2RY4P51582 365 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 RAB32Q13637 225 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 ARFRP1Q13795 201 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 SURF2Q15527 256 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 KCNMB1Q16558 191 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 EIF5AL1Q6IS14 154 aaKnown RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 SLC25A47Q6Q0C1 308 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 DEFB119Q8N690 84 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF775Q96BV0 537 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF501Q96CX3 271 aaPredicted RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 TPSD1Q9BZJ3 242 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 METTL8Q9H825 291 aaKnown RBP16.84■□□□□ 0.29
SDCBP-204ENST00000447182 RHOFQ9HBH0 211 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 GHRLQ9UBU3 117 aa16.84■□□□□ 0.29
SDCBP-204ENST00000447182 SHISA8B8ZZ34 492 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 DUX1O43812 170 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 SLC2A1P11166 492 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 PI3P19957 117 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 LTBRP36941 435 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 ALDH3B1P43353 468 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 OR3A2P47893 321 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 SHISA6Q6ZSJ9 500 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 EMG1Q92979 244 aaKnown RBP16.83■□□□□ 0.28
SDCBP-204ENST00000447182 SDHAF3Q9NRP4 125 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 SLC22A11Q9NSA0 550 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 PRR13Q9NZ81 148 aa16.83■□□□□ 0.28
SDCBP-204ENST00000447182 IGKV1-9A0A0C4DH69 117 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 TRAF3IP2O43734 574 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 ZNF41P51814 821 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 MFAP5Q13361 173 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 PLPPR5Q32ZL2 321 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 GFOD2Q3B7J2 385 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 TSTD1Q8NFU3 115 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 DMBX1Q8NFW5 382 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 OR51F2Q8NH61 342 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 POC1BQ8TC44 478 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 STT3BQ8TCJ2 826 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 FAM71F1Q96KD3 344 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 GPER1Q99527 375 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 TMEM231Q9H6L2 316 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 BIN3Q9NQY0 253 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 ASH2LQ9UBL3 628 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 IGLV3-32A0A0A0MS00 114 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 PQLC2LA1A4F0 135 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 F12P00748 615 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 PRF1P14222 555 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 MUC1P15941 1255 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 GLRA1P23415 457 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 CDAP32320 146 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 SNU13P55769 128 aaKnown RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 ANKRD37Q7Z713 158 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 KMT5CQ86Y97 462 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 OR6X1Q8NH79 312 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 THAP3Q8WTV1 239 aaPredicted RBP16.82■□□□□ 0.28
SDCBP-204ENST00000447182 MICU1Q9BPX6 476 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 FGF21Q9NSA1 209 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 MEMO1Q9Y316 297 aa16.82■□□□□ 0.28
SDCBP-204ENST00000447182 IGLV3-12A0A075B6K2 115 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 PCP4L1A6NKN8 68 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 ANOS1P23352 680 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 ZNF84P51523 738 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 CSNK2A1P68400 391 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-204ENST00000447182 ECH1Q13011 328 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 HIST3H3Q16695 136 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 PNLDC1Q8NA58 520 aaKnown RBP16.81■□□□□ 0.28
SDCBP-204ENST00000447182 SMRP1Q8NCR6 262 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 CSNK2A3Q8NEV1 391 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 OR14K1Q8NGZ2 314 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 GLYATL2Q8WU03 294 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 NECAB3Q96P71 396 aaPredicted RBP16.81■□□□□ 0.28
SDCBP-204ENST00000447182 ST6GALNAC5Q9BVH7 336 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 HRH4Q9H3N8 390 aa16.81■□□□□ 0.28
SDCBP-204ENST00000447182 OR2S2Q9NQN1 319 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms