RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR4K13Q8NH42 304 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 ANGPTL6Q8NI99 470 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 H1FXQ92522 213 aaKnown RBP11.67□□□□□ -0.54
HMGN1-208ENST00000443046 HSH2DQ96JZ2 352 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 WWC2-AS2Q96NR7 200 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 RAB3IPQ96QF0 476 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-208ENST00000443046 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-208ENST00000443046 CMTM6Q9NX76 183 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 CAPN7Q9Y6W3 813 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 TRBV4-1A0A0J9YWV2 114 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 ANKRD30BLA7E2S9 258 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 CDIPTO14735 213 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 ZNF682O95780 498 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 H1F0P07305 194 aaKnown RBP11.66□□□□□ -0.54
HMGN1-208ENST00000443046 TROVE2P10155 538 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGN1-208ENST00000443046 IGLL1P15814 213 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 PAX6P26367 422 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 FAM3AP98173 230 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 HABP2Q14520 560 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-208ENST00000443046 CCBE1Q6UXH8 406 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-208ENST00000443046 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 LNX2Q8N448 690 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 OR5D13Q8NGL4 314 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 OR10Z1Q8NGY1 313 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 OR8S1Q8NH09 359 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 DUS3LQ96G46 650 aaKnown RBP11.66□□□□□ -0.54
HMGN1-208ENST00000443046 MED30Q96HR3 178 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 DDOQ99489 341 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 SIKE1Q9BRV8 207 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 TMEM120AQ9BXJ8 343 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 WDR13Q9H1Z4 485 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 PPP1R3EQ9H7J1 279 aa11.66□□□□□ -0.54
HMGN1-208ENST00000443046 SLC25A10Q9UBX3 287 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-208ENST00000443046 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 VGLL3A8MV65 326 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 SIGLEC5O15389 551 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 XRCC2O43543 280 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 KRT34O76011 436 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 HLA-DQA2P01906 255 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 TFF1P04155 84 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-208ENST00000443046 SLC2A1P11166 492 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 RPS27P42677 84 aaKnown RBP11.65□□□□□ -0.54
HMGN1-208ENST00000443046 BMXP51813 675 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 KLF10Q13118 480 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 FKBP9P1Q75LS8 142 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 SLC16A9Q7RTY1 509 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 CYB561A3Q8NBI2 242 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 ZNRF4Q8WWF5 429 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 DHRS1Q96LJ7 313 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 KCNJ15Q99712 375 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 CDCA4Q9BXL8 241 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 OR52D1Q9H346 318 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 FN3KQ9H479 309 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 GID8Q9NWU2 228 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 NDUFAF4Q9P032 175 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 ZNF391Q9UJN7 358 aa11.65□□□□□ -0.54
HMGN1-208ENST00000443046 A0A0G2JND7 137 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 WI2-2373I1.2A0A1W2PRP0 233 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 CXCR6O00574 342 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 IDH3BO43837 385 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 EDF1O60869 148 aaKnown RBP11.64□□□□□ -0.55
HMGN1-208ENST00000443046 ZNF823P16415 610 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 FAHP16930 419 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 SLC6A6P31641 620 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 PRKXP51817 358 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 BLMHQ13867 455 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 KLHL12Q53G59 568 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 FAM76BQ5HYJ3 339 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 ZBTB37Q5TC79 503 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 ZDHHC21Q8IVQ6 265 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 SLC15A3Q8IY34 581 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 C11orf42Q8N5U0 333 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 FANK1Q8TC84 345 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 DYDC1Q8WWB3 177 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 SGK3Q96BR1 496 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 SNTG1Q9NSN8 517 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 AP3M1Q9Y2T2 418 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
HMGN1-208ENST00000443046 hCG_38984A0A1B0GV85 526 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 A0A1W2PQ09 198 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 NKX6-3A6NJ46 265 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 ANGPTL7O43827 346 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 SERPINA1P01009 418 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 RHCEP18577 417 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 CD33P20138 364 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 GSK3BP49841 420 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 CD83Q01151 205 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 FGD3Q5JSP0 725 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 PRSS45Q7RTY3 260 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 DCXRQ7Z4W1 244 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 SDR9C7Q8NEX9 313 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 OR4C15Q8NGM1 316 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 C7orf34Q96L11 122 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 IFT27Q9BW83 186 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 MRGBPQ9NV56 204 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 RHBDD3Q9Y3P4 386 aa11.63□□□□□ -0.55
HMGN1-208ENST00000443046 IGKV1D-17A0A075B6S4 117 aa11.62□□□□□ -0.55
HMGN1-208ENST00000443046 TRBV23-1A0A0A0MS06 115 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms