RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 THBS1P07996 1170 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CTGFP29279 349 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CX3CR1P49238 355 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 MLF1P58340 268 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CSNK2A1P68400 391 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 TSPO2Q5TGU0 170 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 NCR3LG1Q68D85 454 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 PRR22Q8IZ63 422 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 HIST3H2BBQ8N257 126 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 KDF1Q8NAX2 398 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CSNK2A3Q8NEV1 391 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 OR52N4Q8NGI2 321 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 LCN9Q8WX39 176 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 MVB12AQ96EY5 273 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 GPER1Q99527 375 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 DDA1Q9BW61 102 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 MFRPQ9BY79 579 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 MBNL1Q9NR56 388 aaKnown RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 DNAJB12Q9NXW2 375 aaKnown RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 EHFQ9NZC4 300 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 KCNIP3Q9Y2W7 256 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 MMACHCQ9Y4U1 282 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 LOC107986453A0A1B0GWG9 222 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 A8MXE2 369 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 RAB27BO00194 218 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 B3GALT2O43825 422 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CST4P01036 141 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 C5AR1P21730 350 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CCR2P41597 374 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 DLK1P80370 383 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 RPL18Q07020 188 aaKnown RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 WDR25Q64LD2 544 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 ETFRF1Q6IPR1 90 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF705AQ6ZN79 300 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 TIPARPQ7Z3E1 657 aaKnown RBP6.71□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF664Q8N3J9 261 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 CDRT4Q8N9R6 151 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 RCBTB1Q8NDN9 531 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 OR5T1Q8NG75 326 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 OR5H2Q8NGV7 314 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 TMEM230Q96A57 120 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 C2orf50Q96LR7 162 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 TAAR9Q96RI9 348 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 RNF208Q9H0X6 261 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 UBQLN4Q9NRR5 601 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 MPDZO75970 2070 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ATG2BQ96BY7 2078 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 XKRY2A2RUG3 117 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 FAM157AC9JC47 383 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 SOCS1O15524 211 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 NPSP0C0P6 89 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 SLC35G6P0C7Q6 338 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 PGA3P0DJD8 388 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF708P17019 499 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 S1PR1P21453 382 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 CMPK1P30085 196 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ALDH3B1P43353 468 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 FXYD4P59646 89 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 NHLH2Q02577 135 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 TNFRSF9Q07011 255 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 GGTLC2Q14390 218 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 MESTQ5EB52 335 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 C1orf189Q5VU69 101 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 C17orf99Q6UX52 265 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF595Q8IYB9 648 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 MAML2Q8IZL2 1156 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ASB5Q8WWX0 329 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ASB13Q8WXK3 278 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 MCHR2Q969V1 340 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 MRPL24Q96A35 216 aaKnown RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 KTI12Q96EK9 354 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 IGSF21Q96ID5 467 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF514Q96K75 400 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 GNRHR2Q96P88 292 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 STACQ99469 402 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 FOXQ1Q9C009 403 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 PARP11Q9NR21 331 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 MDC1Q14676 2089 aaKnown RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ADAM10O14672 748 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 SPINT1O43278 529 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 IL2RAP01589 272 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 RAB4AP20338 218 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 CSRP1P21291 193 aaKnown RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 GNG10P50151 68 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 NUTF2P61970 127 aaKnown RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 CDK3Q00526 305 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 SLC17A1Q14916 467 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 HMGN3Q15651 99 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 TMEM128Q5BJH2 165 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF684Q5T5D7 378 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 CBLN3Q6UW01 205 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 LHFPL2Q6ZUX7 228 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 LANCL3Q6ZV70 420 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 VN1R4Q7Z5H5 301 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 GRASPQ7Z6J2 395 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ANGPTL5Q86XS5 388 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms