RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SP1P08047 785 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ANKRD34CP0C6C1 535 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 PSKH1P11801 424 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ATF1P18846 271 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ALOX5APP20292 161 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 MAPK3P27361 379 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 GRPRP30550 384 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 MMP15P51511 669 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 EFNA3P52797 238 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 BLVRAP53004 296 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 EMP2P54851 167 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CLDN20P56880 219 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAB25P57735 213 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC26A5P58743 744 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPS11P62280 158 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 BTG1P62324 171 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CCL7P80098 99 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 DCDP81605 110 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 UBE2V1Q13404 147 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 GPR176Q14439 515 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TOMM34Q15785 309 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SGCBQ16585 318 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 Q499Y3 187 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 NKAIN1Q4KMZ8 207 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 LBHQ53QV2 105 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 MESTQ5EB52 335 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 UBE2NLQ5JXB2 153 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ATAD3CQ5T2N8 411 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM27D1Q5T7N8 215 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 STPG1Q5TH74 334 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 EEF1A1P5Q5VTE0 462 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 C1orf140Q5VVS0 124 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 LIPNQ5VXI9 398 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 LYSMD4Q5XG99 296 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RHBDD2Q6NTF9 364 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 WDR73Q6P4I2 378 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SHISA6Q6ZSJ9 500 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 LANCL3Q6ZV70 420 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 C9orf139Q6ZV77 190 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ASB18Q6ZVZ8 466 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 GRINAQ7Z429 371 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ANKRD37Q7Z713 158 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 UBALD2Q8IYN6 164 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 PM20D2Q8IYS1 436 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6V1Q8N148 313 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 UXS1Q8NBZ7 420 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF114Q8NC26 417 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF248Q8NDW4 579 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 NFAM1Q8NET5 270 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR4M2Q8NGB6 313 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR4D9Q8NGE8 314 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR5L2Q8NGL0 311 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR5H6Q8NGV6 325 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2AJ1Q8NGZ0 328 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6F1Q8NGZ6 308 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR8K3Q8NH51 312 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR5AK2Q8NH90 309 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF671Q8TAW3 534 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUBPLQ8TB37 319 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPS4Y2Q8TD47 263 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 C15orf40Q8WUR7 153 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 THEM6Q8WUY1 208 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CAPSLQ8WWF8 208 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 METTL21AQ8WXB1 218 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ASB17Q8WXJ9 295 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ST8SIA1Q92185 356 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC7A6Q92536 515 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ITFG2Q969R8 447 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CREB3L1Q96BA8 519 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF524Q96C55 264 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC25A36Q96CQ1 311 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ORAI1Q96D31 301 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 S100A16Q96FQ6 103 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ST6GAL2Q96JF0 529 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TSSK2Q96PF2 358 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6C1Q96RD1 312 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CTRCQ99895 268 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 PDCD1LG2Q9BQ51 273 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 C7orf50Q9BRJ6 194 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 MARVELD1Q9BSK0 173 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2B2Q9GZK3 357 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLC5A7Q9GZV3 580 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 COMMD4Q9H0A8 199 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 WNT5BQ9H1J7 359 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ABCG5Q9H222 651 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 DPAGT1Q9H3H5 408 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TXNIPQ9H3M7 391 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAREM1Q9H706 876 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 WDR76Q9H967 626 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 NOX4Q9NPH5 578 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SDHAF3Q9NRP4 125 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 DDX28Q9NUL7 540 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ACOXLQ9NUZ1 547 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CTSFQ9UBX1 484 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUFIP1Q9UHK0 495 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRM2Q9UI43 246 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 LAMP5Q9UJQ1 280 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 IKZF2Q9UKS7 526 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RARRES3Q9UL19 164 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SPATA2Q9UM82 520 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms