RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 IAH1Q2TAA2 248 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 PHLDA2Q53GA4 152 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 EEF1A1P5Q5VTE0 462 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 KCTD18Q6PI47 426 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 ANGPTL5Q86XS5 388 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 C9orf40Q8IXQ3 194 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 ABHD6Q9BV23 337 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CRLF2Q9HC73 371 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 POLE3Q9NRF9 147 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 EHFQ9NZC4 300 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 KLHL13Q9P2N7 655 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 PCNX3Q9H6A9 2034 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 TUBAL3A6NHL2 446 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 POU2F2P09086 479 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 GABRR1P24046 479 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 OPRM1P35372 400 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 GUCA1AP43080 201 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 GLO1Q04760 184 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 FUT7Q11130 342 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR2B11Q5JQS5 317 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 GFI1BQ5VTD9 330 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 SSX9Q7RTT3 188 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 LYG2Q86SG7 212 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF440Q8IYI8 595 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF383Q8NA42 475 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 PIK3IP1Q96FE7 263 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR10C1Q96KK4 312 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 WFIKKN1Q96NZ8 548 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 PAPOLGQ9BWT3 736 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 FAM117AQ9C073 453 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 AKIRIN1Q9H9L7 192 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 SMCO4Q9NRQ5 59 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 EMC3Q9P0I2 261 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 PPP4R1LQ9P1A2 415 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 TMEM14AQ9Y6G1 99 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 TRAV36DV7A0A075B6V5 113 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 CDRT15L2A8MXV6 281 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 UMAD1C9J7I0 102 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 CTDSPLO15194 276 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 KLK2P20151 261 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 HSD11B1P28845 292 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 FHL1Q13642 323 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC26A10Q8NG04 563 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 KIRREL1Q96J84 757 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 C4orf45Q96LM5 186 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 WWTR1Q9GZV5 400 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 CNTD2Q9H8S5 307 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 PLEKHA1Q9HB21 404 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 PTPRSQ13332 1948 aa8.84□□□□□ -0.99
CDC42SE1-202ENST00000439374 IGHV3-15A0A0B4J1V0 119 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 PRSS37A4D1T9 235 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 F5H5K5 113 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 ARPC3O15145 178 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 SULT1B1O43704 296 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 ZNF217O75362 1048 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 IL33O95760 270 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 NOVA1P51513 510 aaKnown RBP8.84□□□□□ -1
CDC42SE1-202ENST00000439374 MRPS10P82664 201 aaKnown RBP8.84□□□□□ -1
CDC42SE1-202ENST00000439374 PJVKQ0ZLH3 352 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 ABHD12BQ7Z5M8 362 aaPredicted RBP8.84□□□□□ -1
CDC42SE1-202ENST00000439374 STX12Q86Y82 276 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 TCTEX1D2Q8WW35 142 aa8.84□□□□□ -1
CDC42SE1-202ENST00000439374 BCAT2O15382 392 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 SOCS1O15524 211 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 HOXC4P09017 264 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 GALP22466 123 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 CAV2P51636 162 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 RPL27P61353 136 aaKnown RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 RIPPLY1Q0D2K3 151 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 IL10RAQ13651 578 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 TMEM182Q6ZP80 229 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 LRRC18Q8N456 261 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 BARX1Q9HBU1 254 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 HAO2Q9NYQ3 351 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 HIF3AQ9Y2N7 669 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 SLC17A2O00624 439 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 SYT7O43581 403 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 IFNA2P01563 188 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 CRHP06850 196 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 CASP6P55212 293 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 TMEM176BQ3YBM2 270 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 MYPOPQ86VE0 399 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 NECAP1Q8NC96 275 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 DYRK2Q92630 601 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 MAGT1Q9H0U3 335 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.83□□□□□ -1
CDC42SE1-202ENST00000439374 ICAM5Q9UMF0 924 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 KCNK7Q9Y2U2 307 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 LRP12Q9Y561 859 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 ROS1P08922 2347 aa8.83□□□□□ -1
CDC42SE1-202ENST00000439374 IGHV1OR21-1A0A087WYE8 117 aa8.82□□□□□ -1
CDC42SE1-202ENST00000439374 TMEM212A6NML5 194 aa8.82□□□□□ -1
CDC42SE1-202ENST00000439374 PHOX2AO14813 284 aa8.82□□□□□ -1
CDC42SE1-202ENST00000439374 MBTPS2O43462 519 aa8.82□□□□□ -1
CDC42SE1-202ENST00000439374 ZNF20P17024 532 aa8.82□□□□□ -1
CDC42SE1-202ENST00000439374 ZNF41P51814 821 aaPredicted RBP8.82□□□□□ -1
CDC42SE1-202ENST00000439374 CLRN1P58418 232 aa8.82□□□□□ -1
CDC42SE1-202ENST00000439374 SLC17A1Q14916 467 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms