RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 OCM2P0CE71 109 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 GALP22466 123 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 TNFSF4P23510 183 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 TSTQ16762 297 aaKnown RBP15.7■□□□□ 0.1
HDAC6-208ENST00000438518 HIST2H2BCQ6DN03 193 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 OR5AS1Q8N127 324 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 PARP16Q8N5Y8 322 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 BHLHE23Q8NDY6 225 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 PHYHIPQ92561 330 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 SOX7Q9BT81 388 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 NEK6Q9HC98 313 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 ABCA4P78363 2273 aa15.7■□□□□ 0.1
HDAC6-208ENST00000438518 DCHS2Q6V1P9 2916 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 PNMA8CA0A1B0GUJ8 204 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 ANXA2P2A6NMY6 339 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 INMTO95050 263 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 HLA-DPB1P04440 258 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 ZNF20P17024 532 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 ALDH3B1P43353 468 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 RPS11P62280 158 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDAC6-208ENST00000438518 ALKBH6Q3KRA9 238 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 CLVS2Q5SYC1 327 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 TMEM42Q69YG0 159 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 SERPINA12Q8IW75 414 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 ZDHHC23Q8IYP9 409 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 CELF2-AS1Q8N7Q2 184 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 RGP1Q92546 391 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-208ENST00000438518 NINJ1Q92982 152 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 ADAT1Q9BUB4 502 aaKnown RBP15.69■□□□□ 0.1
HDAC6-208ENST00000438518 PAPOLGQ9BWT3 736 aaKnown RBP15.69■□□□□ 0.1
HDAC6-208ENST00000438518 CHST5Q9GZS9 411 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 RAB1BQ9H0U4 201 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 SCOCQ9UIL1 159 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 CRYBG3Q68DQ2 2970 aa15.69■□□□□ 0.1
HDAC6-208ENST00000438518 DSCAMO60469 2012 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 ZSCAN5BA6NJL1 495 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 OVOL3O00110 214 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 SC5DO75845 299 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 ALX3O95076 343 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 CD55P08174 381 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 PRF1P14222 555 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 FAHP16930 419 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 GP2P55259 537 aaKnown RBP15.68■□□□□ 0.1
HDAC6-208ENST00000438518 UTS2BQ765I0 119 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 OR51A4Q8NGJ6 313 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 OR5D14Q8NGL3 314 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 OR10AC1Q8NH08 325 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 TMEM106AQ96A25 262 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 HIST1H2AAQ96QV6 131 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 CACNG6Q9BXT2 260 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 IL19Q9UHD0 177 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 SF3B6Q9Y3B4 125 aaKnown RBP15.68■□□□□ 0.1
HDAC6-208ENST00000438518 RHBDD3Q9Y3P4 386 aa15.68■□□□□ 0.1
HDAC6-208ENST00000438518 ANKRD61A6NGH8 418 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 ZNF879B4DU55 563 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 PAX1P15863 534 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 PRSS12P56730 875 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 CNN3Q15417 329 aaKnown RBP15.67■□□□□ 0.1
HDAC6-208ENST00000438518 TESK1Q15569 626 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 OR8G1Q15617 311 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 SSX1Q16384 188 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 TIMM50Q3ZCQ8 353 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 OR8S1Q8NH09 359 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 UBASH3BQ8TF42 649 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 NEU4Q8WWR8 484 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-208ENST00000438518 PIGCQ92535 297 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 FGGYQ96C11 551 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 ELMOD3Q96FG2 381 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 TRMT61AQ96FX7 289 aaKnown RBP15.67■□□□□ 0.1
HDAC6-208ENST00000438518 TMED9Q9BVK6 235 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 EGLN1Q9GZT9 426 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 MSL2Q9HCI7 577 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 C14orf119Q9NWQ9 140 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 CKLFQ9UBR5 152 aa15.67■□□□□ 0.1
HDAC6-208ENST00000438518 OR5B21A6NL26 309 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 LILRA1O75019 489 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 RGS9O75916 674 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-208ENST00000438518 NRASP01111 189 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 IGHV1-46P01743 117 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 NAT2P11245 290 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 TNFRSF1AP19438 455 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 FSTP19883 344 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 CA6P23280 308 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 CD200P41217 278 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 SRP9P49458 86 aaKnown RBP15.66■□□□□ 0.1
HDAC6-208ENST00000438518 PRDX4Q13162 271 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 CEACAM21Q3KPI0 293 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 ACSM3Q53FZ2 586 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 CD200R1LQ6Q8B3 271 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 UNQ9370/PRO34162Q6UXP9 181 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 Q6ZR03 302 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 OR2Z1Q8NG97 314 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 OR5A2Q8NGI9 324 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 SPSB1Q96BD6 273 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 ITPKCQ96DU7 683 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 ADAT3Q96EY9 351 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-208ENST00000438518 MICU1Q9BPX6 476 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 RTL8AQ9BWD3 113 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 CXXC4Q9H2H0 198 aa15.66■□□□□ 0.1
HDAC6-208ENST00000438518 ARFGEF3Q5TH69 2177 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms