RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 CMSS1Q9BQ75 279 aaKnown RBP3.8□□□□□ -1.8
HLA-N-201ENST00000437516 SULT4A1Q9BR01 284 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 TM2D1Q9BX74 207 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 TMEM59Q9BXS4 323 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 MRPL13Q9BYD1 178 aaKnown RBP3.8□□□□□ -1.8
HLA-N-201ENST00000437516 OR10A2Q9H208 303 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 BANF2Q9H503 90 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 TUBA4BQ9H853 241 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 PLEKHA2Q9HB19 425 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 SDHAF3Q9NRP4 125 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 SERINC1Q9NRX5 453 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 MED29Q9NX70 200 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 ALKBH4Q9NXW9 302 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 PPP4R1LQ9P1A2 415 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 SUSD2Q9UGT4 822 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 C14orf166Q9Y224 244 aaKnown RBP3.8□□□□□ -1.8
HLA-N-201ENST00000437516 B3GALT5Q9Y2C3 310 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 RPH3AQ9Y2J0 694 aaPredicted RBP3.8□□□□□ -1.8
HLA-N-201ENST00000437516 FAM96BQ9Y3D0 163 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 TIMM10BQ9Y5J6 103 aa3.8□□□□□ -1.8
HLA-N-201ENST00000437516 BORCS7-ASMTA0A0B4J1R7 106 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 C2orf72A6NCS6 295 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 LIPT2A6NK58 231 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 VSTM2BA6NLU5 285 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 K7EPK0 472 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ETV2O00321 342 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 UBE2CO00762 179 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 GPR137BO60478 399 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 LRP3O75074 770 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 DEDDO75618 318 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 CRTAPO75718 401 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 EIF3GO75821 320 aaKnown RBP eCLIP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 IFNA2P01563 188 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 IFNA21P01568 189 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 IGLV3-1P01715 115 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 CTSDP07339 412 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SFTPBP07988 381 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 HOXB5P09067 269 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ACAA1P09110 424 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SEC11BP0C7V7 166 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ATXN8OSP0DMR3 200 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 NAT2P11245 290 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 FOSL2P15408 326 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ZNF708P17019 499 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 RCC1P18754 421 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 GLRA1P23415 457 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 CTSSP25774 331 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 CD80P33681 288 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 MAS1LP35410 378 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SNCAP37840 140 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 PMELP40967 661 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ARL4DP49703 201 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 EFNA3P52797 238 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SNU13P55769 128 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 UCP2P55851 309 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ZNF121P58317 390 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 CLRN1P58418 232 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 S100A10P60903 97 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SNRPEP62304 92 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 GRB2P62993 217 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 RNF4P78317 190 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 GABREP78334 506 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 FOXF1Q12946 379 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 HABP2Q14520 560 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 NSDHLQ15738 373 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ZNF239Q16600 458 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 GGNBP1Q5YKI7 109 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 FAM109BQ6ICB4 259 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 Q6ZRG5 221 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 Q6ZSR3 168 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 RNF144BQ7Z419 303 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 RTN4RL2Q86UN3 420 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 LURAP1LQ8IV03 231 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SGPP2Q8IWX5 399 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 UEVLDQ8IX04 471 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ZFP82Q8N141 532 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 FAM71E2Q8N5Q1 922 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ZNF283Q8N7M2 679 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 PNLDC1Q8NA58 520 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 BHLHE23Q8NDY6 225 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 TMEM104Q8NE00 496 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 OR51F2Q8NH61 342 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 OR1L3Q8NH93 324 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SNIP1Q8TAD8 396 aaKnown RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 NANPQ8TBE9 248 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 C2CD4CQ8TF44 421 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 SLC25A43Q8WUT9 341 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 RNF138Q8WVD3 245 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 HIST1H2BAQ96A08 127 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 MALSU1Q96EH3 234 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 CPNE2Q96FN4 548 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 PGAM5Q96HS1 289 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ARHGAP5-AS1Q96IT6 56 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 ARL5BQ96KC2 179 aa3.79□□□□□ -1.8
HLA-N-201ENST00000437516 FAM71F1Q96KD3 344 aaPredicted RBP3.79□□□□□ -1.8
HLA-N-201ENST00000437516 PRRX2Q99811 253 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms