RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SMPD2O60906 423 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 GATBO75879 557 aaKnown RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 MPIG6BO95866 241 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 SERPINA3P01011 423 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 OCM2P0CE71 109 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 PCSK6P29122 969 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 NAAAQ02083 359 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF92Q03936 586 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 MALLQ13021 153 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 TNK1Q13470 666 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 CNPY1Q3B7I2 92 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 ASPHD2Q6ICH7 369 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 RFPL4BQ6ZWI9 263 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 DOK3Q7L591 496 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF808Q8N4W9 903 aaPredicted RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 OR13C3Q8NGS6 347 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 OR14K1Q8NGZ2 314 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 OR2AE1Q8NHA4 323 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 LINC01560Q8TB33 94 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 PHYHIPQ92561 330 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 APOBEC3DQ96AK3 386 aaPredicted RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 ADAT3Q96EY9 351 aaPredicted RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 ZC3HAV1LQ96H79 300 aaKnown RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 REEP6Q96HR9 211 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 FAM71F1Q96KD3 344 aaPredicted RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 KCNS3Q9BQ31 491 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 RGCCQ9H4X1 137 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 CDH20Q9HBT6 801 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 NOX4Q9NPH5 578 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF275Q9NSD4 429 aaPredicted RBP6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 DHDHQ9UQ10 334 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 V9GYS6 101 aa6.05□□□□□ -1.44
LSM3P3-201ENST00000436601 TRAV8-7A0A075B6U6 113 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 hCG_38984A0A1B0GV85 526 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 LOC390937A0A1W2PQ73 354 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 DPRXA6NFQ7 191 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 WIPF3A6NGB9 483 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 A6NIN4 97 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SLC22A1O15245 554 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 XRCC2O43543 280 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 NOL3O60936 208 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 ARL6IP5O75915 188 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 CLDN14O95500 239 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 RAF1P04049 648 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 RNF224P0DH78 156 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF182P17025 639 aaPredicted RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 IGFBP3P17936 291 aaPredicted RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 ACKR3P25106 362 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 CALRP27797 417 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SDC2P34741 201 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 RPS19P39019 145 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 UCP2P55851 309 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 ERVS71-1P61550 626 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 FAM3AP98173 230 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SORDQ00796 357 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SRSF1Q07955 248 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SPOCK1Q08629 439 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 GK2Q14410 553 aaPredicted RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 HLXQ14774 488 aaPredicted RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 HSD17B12Q53GQ0 312 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 CEP78Q5JTW2 689 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 PAMR1Q6UXH9 720 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 USP43Q70EL4 1123 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SSX8Q7RTT4 187 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 LRRTM1Q86UE6 522 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 NR2C2APQ86WQ0 139 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 COMMD2Q86X83 199 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 PARP16Q8N5Y8 322 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 DYNC2LI1Q8TCX1 351 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 TSEN15Q8WW01 171 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 AKAP1Q92667 903 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 TMEM106AQ96A25 262 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 FGGYQ96C11 551 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 KCTD7Q96MP8 289 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SLC30A2Q9BRI3 323 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 MED18Q9BUE0 208 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 DCSTAMPQ9H295 470 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 OR51B6Q9H340 312 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 PTTG3PQ9NZH4 202 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 EIF3KQ9UBQ5 218 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF391Q9UJN7 358 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 GSTK1Q9Y2Q3 226 aa6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 MAP1BP46821 2468 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SPENQ96T58 3664 aaKnown RBP6.04□□□□□ -1.44
LSM3P3-201ENST00000436601 SHANK1Q9Y566 2161 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 TRAV1-2A0A0B4J238 106 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 SMIM30A4D0T7 59 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 ATP6V1G2-DDX39BF2Z307 99 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 C19orf84I3L1E1 186 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 MTRF1O75570 445 aaKnown RBP6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 DHRS3O75911 302 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 CDRT1O95170 752 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 CRYAAP02489 173 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF12P17014 697 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 ADRA2CP18825 462 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 SRMP19623 302 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 PTAFRP25105 342 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 MAPK3P27361 379 aaPredicted RBP6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 RAD52P43351 418 aa6.03□□□□□ -1.44
LSM3P3-201ENST00000436601 SERPINB10P48595 397 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms