RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 OR8S1Q8NH09 359 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 SGK3Q96BR1 496 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 ITPKCQ96DU7 683 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 KCTD14Q9BQ13 255 aaPredicted RBP11.09□□□□□ -0.63
LINC00028-201ENST00000435497 TLNRD1Q9H1K6 362 aa11.09□□□□□ -0.63
LINC00028-201ENST00000435497 DCAF13Q9NV06 445 aaKnown RBP11.09□□□□□ -0.63
LINC00028-201ENST00000435497 ANKRD30BLA7E2S9 258 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 H3BUX3 64 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 CDIPTO14735 213 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 XRCC2O43543 280 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 PAHP00439 452 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 SEMG1P04279 462 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 PAX6P26367 422 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 LY6EQ16553 131 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 OXLD1Q5BKU9 147 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 ZNF788Q6ZQV5 615 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 REC114Q7Z4M0 266 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 RORBQ92753 470 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 C12orf43Q96C57 262 aaKnown RBP11.08□□□□□ -0.64
LINC00028-201ENST00000435497 SLAMF6Q96DU3 332 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 SSX3Q99909 188 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 COPS4Q9BT78 406 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 WDR13Q9H1Z4 485 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 TOR3AQ9H497 397 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 OPA3Q9H6K4 179 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 SNTG1Q9NSN8 517 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 CENPMQ9NSP4 180 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 HAO2Q9NYQ3 351 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 ABCD2Q9UBJ2 740 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 COMMD3-BMI1R4GMX3 469 aa11.08□□□□□ -0.64
LINC00028-201ENST00000435497 GADD45GO95257 159 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
LINC00028-201ENST00000435497 GMFBP60983 142 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 ACSM1Q08AH1 577 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 KRT72Q14CN4 511 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 DGUOKQ16854 277 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 LRRC10Q5BKY1 277 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 HACD2Q6Y1H2 254 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 PRSS45Q7RTY3 260 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 LYG1Q8N1E2 194 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 KLHDC1Q8N7A1 406 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 ZNF511Q8NB15 262 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 PROKR2Q8NFJ6 384 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 OR9Q1Q8NGQ5 310 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 MRAPQ8TCY5 172 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 H1FXQ92522 213 aaKnown RBP11.07□□□□□ -0.64
LINC00028-201ENST00000435497 GAFA1Q96PS6 74 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 RAB3IPQ96QF0 476 aaPredicted RBP11.07□□□□□ -0.64
LINC00028-201ENST00000435497 MEGF9Q9H1U4 602 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 EGLN3Q9H6Z9 239 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 EFCAB1Q9HAE3 211 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 ZNF319Q9P2F9 582 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 ZNF391Q9UJN7 358 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 RHBDD3Q9Y3P4 386 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 MAB21L2Q9Y586 359 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 RYR3Q15413 4870 aa11.07□□□□□ -0.64
LINC00028-201ENST00000435497 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 M0R1W7 72 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 ZNF593O00488 134 aaPredicted RBP11.06□□□□□ -0.64
LINC00028-201ENST00000435497 TBX1O43435 398 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 TIPRLO75663 272 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 SPARCP09486 303 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 H2AFXP16104 143 aaPredicted RBP11.06□□□□□ -0.64
LINC00028-201ENST00000435497 LOXL3P58215 753 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 SMIM11AP58511 58 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 MXRA7P84157 204 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 SPIBQ01892 262 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 TSPAN31Q12999 210 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 TAF13Q15543 124 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 TEX30Q5JUR7 227 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 OR4C15Q8NGM1 316 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 OR2T4Q8NH00 348 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 ANGPTL6Q8NI99 470 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 PIFOQ8TCI5 191 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 GNPDA2Q8TDQ7 276 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 PPP1R14AQ96A00 147 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 DUS3LQ96G46 650 aaKnown RBP11.06□□□□□ -0.64
LINC00028-201ENST00000435497 REEP6Q96HR9 211 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 FGF23Q9GZV9 251 aaPredicted RBP11.06□□□□□ -0.64
LINC00028-201ENST00000435497 DNTTIP1Q9H147 329 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 METTL8Q9H825 291 aaKnown RBP11.06□□□□□ -0.64
LINC00028-201ENST00000435497 SAMD4AQ9UPU9 718 aaKnown RBP11.06□□□□□ -0.64
LINC00028-201ENST00000435497 V9GYQ6 96 aa11.06□□□□□ -0.64
LINC00028-201ENST00000435497 ZNF878C9JN71 531 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 GYPBP06028 91 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 GSK3AP49840 483 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 ENTPD1P49961 510 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 PSME3P61289 254 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 NCR3LG1Q68D85 454 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 PGBD2Q6P3X8 592 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 C11orf88Q6PI97 169 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 SLC37A3Q8NCC5 494 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 OR8D4Q8NGM9 314 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 OR10Z1Q8NGY1 313 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 RPL3LQ92901 407 aaKnown RBP11.05□□□□□ -0.64
LINC00028-201ENST00000435497 PYURFQ96I23 114 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 NMNAT2Q9BZQ4 307 aa11.05□□□□□ -0.64
LINC00028-201ENST00000435497 AURKAIP1Q9NWT8 199 aaPredicted RBP11.05□□□□□ -0.64
LINC00028-201ENST00000435497 SLC25A10Q9UBX3 287 aaPredicted RBP11.05□□□□□ -0.64
LINC00028-201ENST00000435497 CD300AQ9UGN4 299 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms