RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 C11orf88Q6PI97 169 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 DCXRQ7Z4W1 244 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 PROKR2Q8NFJ6 384 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 OR51G2Q8NGK0 314 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 OR4C15Q8NGM1 316 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 OR9Q1Q8NGQ5 310 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 RORBQ92753 470 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 CLPTM1LQ96KA5 538 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 KCNJ15Q99712 375 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 FAM234AQ9H0X4 552 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 SNTG1Q9NSN8 517 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 ZNF391Q9UJN7 358 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 MAB21L2Q9Y586 359 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 A0A1W2PQ09 198 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 NKX6-3A6NJ46 265 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 CDIPTO14735 213 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 IDH3BO43837 385 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 SPARCP09486 303 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 BLMHQ13867 455 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 NCR3LG1Q68D85 454 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 PGBD2Q6P3X8 592 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 LYPD4Q6UWN0 246 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC16A9Q7RTY1 509 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 ZDHHC21Q8IVQ6 265 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 CYB561A3Q8NBI2 242 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 C17orf50Q8WW18 174 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 C12orf43Q96C57 262 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 C7orf34Q96L11 122 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 KCTD14Q9BQ13 255 aaPredicted RBP9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 FUZQ9BT04 418 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 PPP1R3EQ9H7J1 279 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 METTL8Q9H825 291 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 NECAP2Q9NVZ3 263 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 AURKAIP1Q9NWT8 199 aaPredicted RBP9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 HAO2Q9NYQ3 351 aa9.46□□□□□ -0.89
CHRNA1-207ENST00000435083 RRP9O43818 475 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 XPNPEP2O43895 674 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 TIPRLO75663 272 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 GADD45GO95257 159 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 TFF1P04155 84 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 ANXA2P07355 339 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 PSKH1P11801 424 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 NDUFB7P17568 137 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 FAM3AP98173 230 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 TIGD6Q17RP2 521 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 ATPAF1Q5TC12 328 aaPredicted RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 STUMQ69YW2 141 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 OR4S1Q8NGB4 309 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 OR51L1Q8NGJ5 315 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 OR2T4Q8NH00 348 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 RP9Q8TA86 221 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 ZNRF4Q8WWF5 429 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 SPSB4Q96A44 273 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 DUS3LQ96G46 650 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 MED30Q96HR3 178 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 DHRS1Q96LJ7 313 aa9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 NKX3-1Q99801 234 aaPredicted RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 HOPXQ9BPY8 73 aaPredicted RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 SLC25A10Q9UBX3 287 aaPredicted RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 SF3B6Q9Y3B4 125 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-207ENST00000435083 H0YAE9 185 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 M0R1W7 72 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 ANGPTL7O43827 346 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 COX4I1P13073 169 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 PAX6P26367 422 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 GNALP38405 381 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 SMIM11AP58511 58 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 SPIBQ01892 262 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 EMX1Q04741 257 aaPredicted RBP9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 DGUOKQ16854 277 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 LRRC75BQ2VPJ9 315 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 GLYATQ6IB77 296 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 CGB2Q6NT52 195 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 ZNF788Q6ZQV5 615 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 FAM86B1Q8N7N1 296 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 SGK3Q96BR1 496 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 R3HDM4Q96D70 268 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 REEP6Q96HR9 211 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 GAFA1Q96PS6 74 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 MICU1Q9BPX6 476 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 PAPOLGQ9BWT3 736 aaKnown RBP9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 WDR13Q9H1Z4 485 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 MMP28Q9H239 520 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 RANBP3Q9H6Z4 567 aaPredicted RBP9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 RAB18Q9NP72 206 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 FGFR1OP2Q9NVK5 253 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 COMMD3-BMI1R4GMX3 469 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 V9GYQ6 96 aa9.45□□□□□ -0.9
CHRNA1-207ENST00000435083 ZNF878C9JN71 531 aa9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 ZNF593O00488 134 aaPredicted RBP9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 FBXO24O75426 580 aa9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 CX3CR1P49238 355 aa9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 GFOD2Q3B7J2 385 aa9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 DTX3Q8N9I9 347 aa9.44□□□□□ -0.9
CHRNA1-207ENST00000435083 GNPDA2Q8TDQ7 276 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms