RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 KIAA1324LA8MWY0 1029 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 NPIPB9F8W1W9 429 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 KCNAB3O43448 404 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 WISP2O76076 250 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 IGKV3-15P01624 115 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ALDOCP09972 364 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PGA4P0DJD7 388 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PGA3P0DJD8 388 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZFP36P26651 326 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 HILS1P60008 231 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 GABPB1Q06547 395 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PRDX4Q13162 271 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 C11orf91Q3C1V1 193 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SLC35D3Q5M8T2 416 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 C6orf183Q5T699 404 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SLC35F2Q8IXU6 374 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 TAMM41Q96BW9 452 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PKP2Q99959 881 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SPACA1Q9HBV2 294 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 RAB21Q9UL25 225 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 B9D1Q9UPM9 204 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 STARD10Q9Y365 291 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 MTORP42345 2549 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 OR6C68A6NDL8 312 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 MRPL3P09001 348 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PRKACAP17612 351 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 HTR1DP28221 377 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 OR3A4PP47883 348 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PAGE3Q5JUK9 113 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 C10orf128Q5T292 105 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 CORO6Q6QEF8 472 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 KIR3DL3Q8N743 410 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 FAM71CQ8NEG0 241 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 OR5D14Q8NGL3 314 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 OR10Z1Q8NGY1 313 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF420Q8TAQ5 688 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 WDFY2Q96P53 400 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PLA2G12AQ9BZM1 189 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 DNAJB9Q9UBS3 223 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 TRAPPC2LQ9UL33 140 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 DSCAMO60469 2012 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ACOD1A6NK06 481 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 C17orf51A8MQB3 221 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 G3V2T6 193 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 DHFRP00374 187 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 IGHV2-5P01817 119 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SLC2A1P11166 492 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 RAB3AP20336 220 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 RBP2P50120 134 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 LHFPL2Q6ZUX7 228 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 CELF2-AS1Q8N7Q2 184 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 Q8NFD4 153 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF714Q96N38 554 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 RASL12Q9NYN1 266 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 HHLA2Q9UM44 414 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SONP18583 2426 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 IGHV2-70DA0A0C4DH43 119 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 ANKRD34BA5PLL1 514 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 MCRIP1C9JLW8 97 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 RER1O15258 196 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 HOXA3O43365 443 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 PTP4A3O75365 173 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 DUS4LO95620 317 aaKnown RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 CALCRP30988 508 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 HAAOP46952 286 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 GPM6AP51674 278 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 CBLL1Q75N03 491 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 C11orf44Q8N8P7 122 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 S1PR3Q99500 378 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 URM1Q9BTM9 101 aaKnown RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 YIPF3Q9GZM5 350 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 METTL9Q9H1A3 318 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 SHANK1Q9Y566 2161 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 IGHV3OR15-7A0A075B7D8 119 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 SNNO75324 88 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 UBCP0CG48 685 aaKnown RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 ETV4P43268 484 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 AWAT1Q58HT5 328 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 WDR25Q64LD2 544 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 FAHD1Q6P587 224 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 HACD2Q6Y1H2 254 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 COLCA1Q6ZS62 124 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 VTCN1Q7Z7D3 282 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 SGPP2Q8IWX5 399 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 CIARTQ8N365 385 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 LRRC17Q8N6Y2 441 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 IL17DQ8TAD2 202 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 HDAC2Q92769 488 aaKnown RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 SSX3Q99909 188 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 C9orf16Q9BUW7 83 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 JAM3Q9BX67 310 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 CST11Q9H112 138 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 KAT8Q9H7Z6 458 aaKnown RBP3.9□□□□□ -1.78
UBE4A-202ENST00000431736 HIF3AQ9Y2N7 669 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 ALPK2Q86TB3 2170 aa3.9□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF106Q9H2Y7 1883 aaKnown RBP3.9□□□□□ -1.79
UBE4A-202ENST00000431736 NPIPB13A6NJU9 1138 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 NPIPB4C9JG80 1138 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 PIN1P1O15428 100 aa3.9□□□□□ -1.79
UBE4A-202ENST00000431736 DIRAS1O95057 198 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms