RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SLC30A2Q9BRI3 323 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 SOX7Q9BT81 388 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 TMED9Q9BVK6 235 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 CACNG6Q9BXT2 260 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 NEK6Q9HC98 313 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 TMEM100Q9NV29 134 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 SCOCQ9UIL1 159 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 ZDHHC8Q9ULC8 765 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 MPC1Q9Y5U8 109 aa9.4□□□□□ -0.9
CHD4-202ENST00000430771 DSCAMO60469 2012 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 TRBV5-5A0A0J9YX44 114 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 ANKRD61A6NGH8 418 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 ZSCAN5BA6NJL1 495 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 C17orf100A8MU93 164 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 H7C417 338 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 RGS9O75916 674 aaPredicted RBP9.39□□□□□ -0.91
CHD4-202ENST00000430771 CST4P01036 141 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 HLA-DPB1P04440 258 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 ADH4P08319 380 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 OCMP0CE72 109 aaPredicted RBP9.39□□□□□ -0.91
CHD4-202ENST00000430771 JUNBP17275 347 aaPredicted RBP9.39□□□□□ -0.91
CHD4-202ENST00000430771 MMP15P51511 669 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 TNK1Q13470 666 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 OR8G1Q15617 311 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 TMEM255AQ5JRV8 349 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 FAM209AQ5JX71 171 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 CLVS2Q5SYC1 327 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 SPERTQ8NA61 448 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 OR51A4Q8NGJ6 313 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 OR13C5Q8NGS8 318 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 OR10AC1Q8NH08 325 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 OR8S1Q8NH09 359 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 UBASH3BQ8TF42 649 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 TMEM106AQ96A25 262 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 ELMOD3Q96FG2 381 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 RAB1BQ9H0U4 201 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 ZNF275Q9NSD4 429 aaPredicted RBP9.39□□□□□ -0.91
CHD4-202ENST00000430771 NKIRAS2Q9NYR9 191 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 CKLFQ9UBR5 152 aa9.39□□□□□ -0.91
CHD4-202ENST00000430771 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
CHD4-202ENST00000430771 ZNF879B4DU55 563 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 GMDSO60547 372 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 NAT2P11245 290 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 PRF1P14222 555 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 FSTP19883 344 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 CA6P23280 308 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 DNASE1P24855 282 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 SOX2P48431 317 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 GP2P55259 537 aaKnown RBP9.38□□□□□ -0.91
CHD4-202ENST00000430771 RPS25P62851 125 aaKnown RBP9.38□□□□□ -0.91
CHD4-202ENST00000430771 PPP3R1P63098 170 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 PRDX4Q13162 271 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 TESK1Q15569 626 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 SSX1Q16384 188 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 MST1LQ2TV78 715 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 TIMM50Q3ZCQ8 353 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 TMEM42Q69YG0 159 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 UTS2BQ765I0 119 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 KRT74Q7RTS7 529 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 OR2Z1Q8NG97 314 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 OR10AD1Q8NGE0 317 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 PIGCQ92535 297 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 PHYHIPQ92561 330 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 NINJ1Q92982 152 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 CPNE2Q96FN4 548 aaPredicted RBP9.38□□□□□ -0.91
CHD4-202ENST00000430771 HIST1H2AAQ96QV6 131 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 OR14A2Q96R54 314 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 VRK1Q99986 396 aaPredicted RBP9.38□□□□□ -0.91
CHD4-202ENST00000430771 MICU1Q9BPX6 476 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 RTL8AQ9BWD3 113 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 EGLN1Q9GZT9 426 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 TPK1Q9H3S4 243 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 C14orf119Q9NWQ9 140 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 RHBDD3Q9Y3P4 386 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 ROS1P08922 2347 aa9.38□□□□□ -0.91
CHD4-202ENST00000430771 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
CHD4-202ENST00000430771 ARFGEF3Q5TH69 2177 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 A0A1B0GWJ7 208 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 OR5B21A6NL26 309 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 TMEM210A6NLX4 147 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 ZNF850A8MQ14 1090 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 MLNRO43193 412 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 TPD52L2O43399 206 aaKnown RBP9.37□□□□□ -0.91
CHD4-202ENST00000430771 SPRY3O43610 288 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 LILRA1O75019 489 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 NRASP01111 189 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 CD8AP01732 235 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 IGHV1-46P01743 117 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 CD55P08174 381 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 TNFRSF1AP19438 455 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 GALP22466 123 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 CDKN1AP38936 164 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 SRP9P49458 86 aaKnown RBP9.37□□□□□ -0.91
CHD4-202ENST00000430771 RPS11P62280 158 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHD4-202ENST00000430771 TNFAIP6P98066 277 aaPredicted RBP9.37□□□□□ -0.91
CHD4-202ENST00000430771 Q6ZR03 302 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 SERPINA12Q8IW75 414 aa9.37□□□□□ -0.91
CHD4-202ENST00000430771 PARP16Q8N5Y8 322 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms