RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SLC25A35Q3KQZ1 300 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 HES3Q5TGS1 186 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 LYG2Q86SG7 212 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 SUMF2Q8NBJ7 301 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 GPX7Q96SL4 187 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-208ENST00000430669 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 LIMS1P48059 325 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 CD226Q15762 336 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 CEACAM16Q2WEN9 425 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 TRAT1Q6PIZ9 186 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 TMEM185AQ8NFB2 350 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 USB1Q9BQ65 265 aaKnown RBP10.31□□□□□ -0.76
PTCH1-208ENST00000430669 ZNF275Q9NSD4 429 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-208ENST00000430669 RNF150Q9ULK6 438 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 DIDO1Q9BTC0 2240 aaKnown RBP10.31□□□□□ -0.76
PTCH1-208ENST00000430669 LUMP51884 338 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-208ENST00000430669 NDRG3Q9UGV2 375 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 ADRA2CP18825 462 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 SPRED2Q7Z698 418 aa10.31□□□□□ -0.76
PTCH1-208ENST00000430669 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 CRYAAP02489 173 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 LIPCP11150 499 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 PXT1Q8NFP0 134 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 ST3GAL6Q9Y274 331 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 TMEM235A6NFC5 223 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 MPPED1O15442 326 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 IGHV3-9P01782 118 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 ANKRD16Q6P6B7 361 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 CBLN3Q6UW01 205 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 ROBO4Q8WZ75 1007 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 BTF3L4Q96K17 158 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 OR5H15A6NDH6 313 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 HS3ST1O14792 307 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 GRPP07492 148 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 CDAP32320 146 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 LCN10Q6JVE6 187 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 FAM109AQ8N4B1 249 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 LIFP15018 202 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 TGFBR1P36897 503 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 GNG3P63215 75 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 GAB4Q2WGN9 574 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 SCARB1Q8WTV0 552 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 ALKBH3Q96Q83 286 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-208ENST00000430669 SLC23A1Q9UHI7 598 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 RTTNQ86VV8 2226 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 TMEM272A0A1B0GTI8 110 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 TMUB2Q71RG4 321 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 TSEN54Q7Z6J9 526 aaKnown RBP10.3□□□□□ -0.76
PTCH1-208ENST00000430669 LINC00596Q86U02 117 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 GTF3C1Q12789 2109 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 OR4E1P0C645 316 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 PTGFRP43088 359 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 MPPED2Q15777 294 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 RTL8BQ17RB0 113 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 PDLIM3Q53GG5 364 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-208ENST00000430669 TMEM128Q5BJH2 165 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 ATPAF1Q5TC12 328 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-208ENST00000430669 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 EDARADDQ8WWZ3 215 aa10.3□□□□□ -0.76
PTCH1-208ENST00000430669 B3GALNT1O75752 331 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 SLC22A25Q6T423 547 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 PRKNO60260 465 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-208ENST00000430669 CTLA4P16410 223 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 RBMS3Q6XE24 437 aaKnown RBP10.29□□□□□ -0.76
PTCH1-208ENST00000430669 TIMD4Q96H15 378 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 PIGMQ9H3S5 423 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 ZNF318Q5VUA4 2279 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 NPIPB13A6NJU9 1138 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 NPIPB4C9JG80 1138 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 CTAG2O75638 210 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 LY86O95711 162 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 IFNA4P05014 189 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 HAAOP46952 286 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 MVDP53602 400 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 MLF1P58340 268 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 KISS1Q15726 138 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 DOCK7Q96N67 2140 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 COPS3Q9UNS2 423 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 A8MXE2 369 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 E5RGE8 158 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-208ENST00000430669 IAH1Q2TAA2 248 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-208ENST00000430669 ADGRG3Q86Y34 549 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 SLC25A32Q9H2D1 315 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 NSG2Q9Y328 171 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 OR5B21A6NL26 309 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 BAK1Q16611 211 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 SLC23A3Q6PIS1 610 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 CATSPERDQ86XM0 798 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 ZNF687Q8N1G0 1237 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 OR4C16Q8NGL9 310 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 OCIAD1Q9NX40 245 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 A0A096LPE4 126 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
PTCH1-208ENST00000430669 TSPAN2O60636 221 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms