RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SCAND1P57086 179 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 DCAF7P61962 342 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 C17orf67Q0P5P2 114 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 IKZF1Q13422 519 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 IGSF11Q5DX21 431 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 PHF19Q5T6S3 580 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 TSPO2Q5TGU0 170 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 RTN4RL2Q86UN3 420 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 ZDHHC22Q8N966 263 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 GPBAR1Q8TDU6 330 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 EDAQ92838 391 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 PHYHIPLQ96FC7 376 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 REEP6Q96HR9 211 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 C2orf50Q96LR7 162 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 GPX7Q96SL4 187 aaPredicted RBP12.24□□□□□ -0.45
SGMS1-203ENST00000429490 CHST11Q9NPF2 352 aa12.24□□□□□ -0.45
SGMS1-203ENST00000429490 IGHV3-15A0A0B4J1V0 119 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 RAB19A4D1S5 217 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 OR6C65A6NJZ3 312 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 MBTPS2O43462 519 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 BGLAPP02818 100 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 EPHA1P21709 976 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 TAS2R46P59540 309 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 RAB2AP61019 212 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 UQCC3Q6UW78 93 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 LINC00114Q6XXX2 140 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 PLXDC1Q8IUK5 500 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 LUZP4Q9P127 313 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 DOCK8Q8NF50 2099 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 OR7C1O76099 320 aaPredicted RBP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 IFNA2P01563 188 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 HNRNPKP61978 463 aaKnown RBP eCLIP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 KIRREL1Q96J84 757 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 MMP26Q9NRE1 261 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 GPR173Q9NS66 373 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 hCG_1809904A0A1W2PP81 198 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 A0A1W2PR64 198 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 A0A1W2PRV1 198 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 TRAPPC6AO75865 159 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 GUSBP08236 651 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 NME1P15531 152 aaKnown RBP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 LAP3P28838 519 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 PCK2Q16822 640 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 MIDNQ504T8 468 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 SOHLH1Q5JUK2 328 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 ZSCAN4Q8NAM6 433 aaPredicted RBP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 SUMF2Q8NBJ7 301 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
SGMS1-203ENST00000429490 FLVCR1-AS1Q8TAF5 88 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 MED9Q9NWA0 146 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 CA14Q9ULX7 337 aa12.23□□□□□ -0.45
SGMS1-203ENST00000429490 UMAD1C9J7I0 102 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 NPIPB9F8W1W9 429 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 BPNT1O95861 308 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 DBHP09172 617 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
SGMS1-203ENST00000429490 DHODHQ02127 395 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PGAP1Q75T13 922 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 BHLHE23Q8NDY6 225 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PFDN5Q99471 154 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PBDC1Q9BVG4 233 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 FBXL17Q9UF56 701 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PIGLQ9Y2B2 252 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 HS3ST3A1Q9Y663 406 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 RALGAPA1Q6GYQ0 2036 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 DOCK7Q96N67 2140 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 KIAA1671Q9BY89 1806 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 A6NLC8 198 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 ADAM10O14672 748 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PHF1O43189 567 aaPredicted RBP12.22□□□□□ -0.45
SGMS1-203ENST00000429490 RBMXL2O75526 392 aaKnown RBP12.22□□□□□ -0.45
SGMS1-203ENST00000429490 RAD51DO75771 328 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 C1QL1O75973 258 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 CSNK1A1P48729 337 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 NDUFA6P56556 154 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 STT3BQ8TCJ2 826 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 LPAR3Q9UBY5 353 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 RFC3P40938 356 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PTGFRP43088 359 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 MRPS21P82921 87 aaKnown RBP12.22□□□□□ -0.45
SGMS1-203ENST00000429490 USF2Q15853 346 aaPredicted RBP12.22□□□□□ -0.45
SGMS1-203ENST00000429490 ZNF260Q3ZCT1 412 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 OR2A2Q6IF42 318 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 OR14K1Q8NGZ2 314 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 BORCS8Q96FH0 119 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 MMACHCQ9Y4U1 282 aa12.22□□□□□ -0.45
SGMS1-203ENST00000429490 PLXNA2O75051 1894 aa12.21□□□□□ -0.45
SGMS1-203ENST00000429490 DIDO1Q9BTC0 2240 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms