RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SLITRK2Q9H156 845 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 UBTD1Q9HAC8 227 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 TCF7L1Q9HCS4 588 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 DYNLRB1Q9NP97 96 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 GPR173Q9NS66 373 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 TXNL4BQ9NX01 149 aaKnown RBP6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 CISD1Q9NZ45 108 aaKnown RBP6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 GPR160Q9UJ42 338 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 GSTK1Q9Y2Q3 226 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 RHBDD3Q9Y3P4 386 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 RELNP78509 3460 aa6.78□□□□□ -1.32
HMGA1P4-201ENST00000428643 TRAV8-7A0A075B6U6 113 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 SMIM30A4D0T7 59 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ANXA2P2A6NMY6 339 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF850A8MQ14 1090 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 IQCF6A8MYZ5 107 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 M0R233 179 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 HS3ST1O14792 307 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PIN1P1O15428 100 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 LILRA1O75019 489 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 SC5DO75845 299 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 NRASP01111 189 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGHV3-13P01766 116 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 RAF1P04049 648 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 UCHL1P09936 223 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF250P15622 560 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 FSTP19883 344 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 RAB3AP20336 220 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 KITLGP21583 273 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CA6P23280 308 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 FGF9P31371 208 aaPredicted RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 APOBEC3AP31941 199 aaPredicted RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ALDH3B1P43353 468 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 SERPINB10P48595 397 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMBIM6P55061 237 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 VBP1P61758 197 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 NCS1P62166 190 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 SNRPD2P62316 118 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PRDX4Q13162 271 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 TNK1Q13470 666 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CNN3Q15417 329 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR8G1Q15617 311 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CTF1Q16619 201 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 MOGQ16653 247 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMEM255AQ5JRV8 349 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CEP78Q5JTW2 689 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CLVS2Q5SYC1 327 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 GDPGP1Q6ZNW5 385 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 Q6ZSR3 168 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 SERPINA12Q8IW75 414 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZDHHC23Q8IYP9 409 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PARP16Q8N5Y8 322 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR8G5Q8NG78 346 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR1M1Q8NGA1 313 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR10AD1Q8NGE0 317 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR5D14Q8NGL3 314 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR8S1Q8NH09 359 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 LILRB1Q8NHL6 650 aaPredicted RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF420Q8TAQ5 688 aaPredicted RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PIGCQ92535 297 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 DVL3Q92997 716 aaPredicted RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PIGTQ969N2 578 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ITFG2Q969R8 447 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 FBXW5Q969U6 566 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 C10orf35Q96D05 121 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PPIL3Q9H2H8 161 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CLEC4MQ9H2X3 399 aaPredicted RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZCCHC4Q9H5U6 513 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 RNF167Q9H6Y7 350 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 MSL2Q9HCI7 577 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 BATF3Q9NR55 127 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 SNTG1Q9NSN8 517 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 FAIMQ9NVQ4 179 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 MRPL15Q9P015 296 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 TAAR3PQ9P1P4 343 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 MYEF2Q9P2K5 600 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 RSL24D1Q9UHA3 163 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 NOP16Q9Y3C1 178 aaKnown RBP6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CEPT1Q9Y6K0 416 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
HMGA1P4-201ENST00000428643 CACNA1CQ13936 2221 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGLV3-9A0A075B6K5 115 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 FAM230AA0A1W2PPH8 454 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZSCAN5BA6NJL1 495 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 H3BMQ9 156 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 SLC22A1O15245 554 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 MAGEB3O15480 346 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 SULT1B1O43704 296 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 GMDSO60547 372 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 CST4P01036 141 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 MAS1P04201 325 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 ERCC1P07992 297 aaPredicted RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 HCKP08631 526 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 PRKACBP22694 351 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 AZGP1P25311 298 aaKnown RBP6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 COL8A1P27658 744 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 TGFBR1P36897 503 aa6.76□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF81P51508 661 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms