RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KPTNQ9Y664 436 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
VARS-216ENST00000428445 ANKRD30BLA7E2S9 258 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 CDIPTO14735 213 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 PRB2P02812 416 aaPredicted RBP13.57□□□□□ -0.24
VARS-216ENST00000428445 ANXA2P07355 339 aaKnown RBP13.57□□□□□ -0.24
VARS-216ENST00000428445 PAX6P26367 422 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 MICBQ29980 383 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 KLHL12Q53G59 568 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 DHRS7BQ6IAN0 325 aaPredicted RBP13.57□□□□□ -0.24
VARS-216ENST00000428445 GDPGP1Q6ZNW5 385 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 PGAM4Q8N0Y7 254 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 C17orf50Q8WW18 174 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 H1FXQ92522 213 aaKnown RBP13.57□□□□□ -0.24
VARS-216ENST00000428445 BTBD10Q9BSF8 475 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 WDR13Q9H1Z4 485 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 C16orf95Q9H693 158 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 BRD7Q9NPI1 651 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 NDE1Q9NXR1 346 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 DNAJC27Q9NZQ0 273 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 BAIAP2Q9UQB8 552 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 CDH10Q9Y6N8 788 aa13.57□□□□□ -0.24
VARS-216ENST00000428445 A0A1B0GVI7 797 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 G3V4G9 280 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 NPFFO15130 113 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 XRCC2O43543 280 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 GASTP01350 101 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 APOC1P02654 83 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 FMO3P31513 532 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 GRK5P34947 590 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 SLC15A1P46059 708 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 CX3CR1P49238 355 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 ENTPD1P49961 510 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 CRMP1Q14194 572 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 GFOD2Q3B7J2 385 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 SLC35E4Q6ICL7 350 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 RASSF6Q6ZTQ3 369 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 FAM57BQ71RH2 274 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 C11orf44Q8N8P7 122 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 OR4Q3Q8NH05 313 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 SPSB4Q96A44 273 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 REEP6Q96HR9 211 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 CDRT15Q96T59 188 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 PPA2Q9H2U2 334 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 RNPEPL1Q9HAU8 725 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 PRPF19Q9UMS4 504 aaKnown RBP13.56□□□□□ -0.24
VARS-216ENST00000428445 RHBDD3Q9Y3P4 386 aa13.56□□□□□ -0.24
VARS-216ENST00000428445 DHRS12A0PJE2 317 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 GPR37O15354 613 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 ATP8B1O43520 1251 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 NDUFB3O43676 98 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 SNX3O60493 162 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 MUC1P15941 1255 aaPredicted RBP13.55□□□□□ -0.24
VARS-216ENST00000428445 TGM4P49221 684 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 TIGD6Q17RP2 521 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 OR6K6Q8NGW6 343 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 PPP1R35Q8TAP8 253 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 RPL3LQ92901 407 aaKnown RBP13.55□□□□□ -0.24
VARS-216ENST00000428445 TNFRSF14Q92956 283 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 AMELYQ99218 206 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 DCTN5Q9BTE1 182 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 TSSK6Q9BXA6 273 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 FGF23Q9GZV9 251 aaPredicted RBP13.55□□□□□ -0.24
VARS-216ENST00000428445 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 MED20Q9H944 212 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 ZNF391Q9UJN7 358 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
VARS-216ENST00000428445 MEIOCA2RUB1 952 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 ZNF878C9JN71 531 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 TNFRSF11BO00300 401 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 ARPC2O15144 300 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 TIPRLO75663 272 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 TSPAN9O75954 239 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 FBP1P09467 338 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 CSF1P09603 554 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 SPI1P17947 270 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 CFL1P23528 166 aaKnown RBP13.54□□□□□ -0.24
VARS-216ENST00000428445 GSK3AP49840 483 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 SLC25A1P53007 311 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 GRB2P62993 217 aaKnown RBP13.54□□□□□ -0.24
VARS-216ENST00000428445 EIF2B1Q14232 305 aaKnown RBP13.54□□□□□ -0.24
VARS-216ENST00000428445 SNCBQ16143 134 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 LY6EQ16553 131 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 C16orf89Q6UX73 402 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 C1orf122Q6ZSJ8 110 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 PRSS45Q7RTY3 260 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 SLC36A1Q7Z2H8 476 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 NPRL2Q8WTW4 380 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 LRTOMTQ8WZ04 291 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 RORBQ92753 470 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 ELL3Q9HB65 397 aaPredicted RBP13.54□□□□□ -0.24
VARS-216ENST00000428445 TBC1D23Q9NUY8 699 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 ARMC1Q9NVT9 282 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 FOXJ3Q9UPW0 622 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 PLXNB1O43157 2135 aa13.54□□□□□ -0.24
VARS-216ENST00000428445 hCG_38984A0A1B0GV85 526 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 AKR7A2O43488 359 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 SOX14O95416 240 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms