RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ANKRD16Q6P6B7 361 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 WFDC8Q8IUA0 241 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 WDR31Q8NA23 367 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 OR6M1Q8NGM8 313 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 SYNPRQ8TBG9 265 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 PPP1R14AQ96A00 147 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 NABP1Q96AH0 204 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 C1QTNF6Q9BXI9 259 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 PNRC2Q9NPJ4 139 aaKnown RBP13.56□□□□□ -0.24
SHOX2-202ENST00000425436 A0A0B4J203 849 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 LOC100289279A0A1B0GTE1 492 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 FAM240BA0A1B0GVZ2 78 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 OR5H1A6NKK0 313 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 ECDO95905 644 aaPredicted RBP13.55□□□□□ -0.24
SHOX2-202ENST00000425436 TTRP02766 147 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 AP3S2P59780 193 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 TBRG1Q3YBR2 411 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 ELFN2Q5R3F8 820 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF787Q6DD87 383 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 CDH26Q8IXH8 852 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 SPTSSAQ969W0 71 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 PHF21AQ96BD5 680 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 FOXB1Q99853 325 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 DIABLOQ9NR28 239 aa13.55□□□□□ -0.24
SHOX2-202ENST00000425436 MRPS7Q9Y2R9 242 aaKnown RBP13.55□□□□□ -0.24
SHOX2-202ENST00000425436 GABARAPH6UMI1 98 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 P2RY10O00398 339 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 GSTT2BP0CG30 244 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 PPP3CBP16298 524 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 CX3CR1P49238 355 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SCRN3Q0VDG4 424 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 DYRK1AQ13627 763 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 ENDOGQ14249 297 aaKnown RBP13.54□□□□□ -0.24
SHOX2-202ENST00000425436 PPA1Q15181 289 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TIMM23BQ5SRD1 257 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 FAM166AQ6J272 317 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 PGAP1Q75T13 922 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 DOK3Q7L591 496 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TOMM5Q8N4H5 51 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF283Q8N7M2 679 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 DRAXINQ8NBI3 349 aaPredicted RBP13.54□□□□□ -0.24
SHOX2-202ENST00000425436 C1orf162Q8NEQ5 155 aaPredicted RBP13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SMIM4Q8WVI0 70 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 DEDD2Q8WXF8 326 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TRIM63Q969Q1 353 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 PTX4Q96A99 478 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 OR10A4Q9H209 315 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 PLEKHA1Q9HB21 404 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TMEM138Q9NPI0 162 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TMEM38BQ9NVV0 291 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TAS2R4Q9NYW5 299 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 COPZ2Q9P299 210 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
SHOX2-202ENST00000425436 NBPF19A0A087WUL8 3843 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 A0A0A6YYH2 397 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 LOC390937A0A1W2PQ73 354 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF503-AS2A6NEH8 195 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 A6NJ64 397 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 XRCC3O43542 346 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 PATE4P0C8F1 98 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 CCL1P22362 96 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 HTR2CP28335 458 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 BDKRB2P30411 391 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 DDOSTP39656 456 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF121P58317 390 aaPredicted RBP13.54□□□□□ -0.24
SHOX2-202ENST00000425436 C1orf100Q5SVJ3 147 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 TMEM69Q5SWH9 247 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 AGAP6Q5VW22 663 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SKA3Q8IX90 412 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 LRRC18Q8N456 261 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SLC22A24Q8N4F4 322 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 FAM222BQ8WU58 562 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 FCAMRQ8WWV6 532 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 FAM3DQ96BQ1 224 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 C10orf35Q96D05 121 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 MUCL1Q96DR8 90 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SLC25A38Q96DW6 304 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SORCS2Q96PQ0 1159 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 NEDD4LQ96PU5 975 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 UQCC2Q9BRT2 126 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 RNF121Q9H920 327 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 SLC25A15Q9Y619 301 aa13.54□□□□□ -0.24
SHOX2-202ENST00000425436 A0A0U1RQV5 110 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 FARS2O95363 451 aaKnown RBP13.53□□□□□ -0.24
SHOX2-202ENST00000425436 HLA-HP01893 362 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 TRAPPC2P0DI81 140 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 TRAPPC2BP0DI82 140 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF20P17024 532 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 RAB3AP20336 220 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 HOXC12P31275 282 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 PRKXP51817 358 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 CLDN12P56749 244 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 UBE2NP61088 152 aaKnown RBP13.53□□□□□ -0.24
SHOX2-202ENST00000425436 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 RAB35Q15286 201 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 DNAAF1Q8NEP3 725 aa13.53□□□□□ -0.24
SHOX2-202ENST00000425436 FGFBP3Q8TAT2 258 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms