RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 THEGLP0DJG4 465 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 ZNF708P17019 499 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 CX3CR1P49238 355 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 CDK3Q00526 305 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 PSG6Q00889 435 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 GGNBP1Q5YKI7 109 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 FGGYQ96C11 551 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 R3HDM4Q96D70 268 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 TRIM2Q9C040 744 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 TMED3Q9Y3Q3 217 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 NUP210LQ5VU65 1888 aa10.04□□□□□ -0.8
SEC61A1-202ENST00000424880 MASP2O00187 686 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ADAM10O14672 748 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SOCS1O15524 211 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SLC16A7O60669 478 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 HNRNPKP61978 463 aaKnown RBP eCLIP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 RAB1AP62820 205 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SSPNQ14714 243 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ARHGAP19Q14CB8 494 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 EIF5AL1Q6IS14 154 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CDRT4Q8N9R6 151 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SUMF2Q8NBJ7 301 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 OR5D18Q8NGL1 313 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 TERB2Q8NHR7 220 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 HPSE2Q8WWQ2 592 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 MUCL1Q96DR8 90 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ZNF514Q96K75 400 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 NOL4LQ96MY1 436 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SLC26A1Q9H2B4 701 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CENPMQ9NSP4 180 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 OR14J1Q9UGF5 321 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 IL17BQ9UHF5 180 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 MMACHCQ9Y4U1 282 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ARHGAP21Q5T5U3 1957 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 IGKV1D-42A0A075B6H8 117 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 PRRT4C9JH25 899 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 H3BQ15 152 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CTSVO60911 334 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 EML2O95834 649 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 C8AP07357 584 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CTSBP07858 339 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 MYOGP15173 224 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 AFF3P51826 1226 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 UBE2KP61086 200 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 HNF4GQ14541 408 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 TMEM268Q5VZI3 342 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 PLXDC2Q6UX71 529 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 TMEM156Q8N614 296 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 LINC00615Q96LM1 132 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SLC35B3Q9H1N7 401 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 WFDC1Q9HC57 220 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CUTCQ9NTM9 273 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CBLN4Q9NTU7 201 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 FBXL21Q9UKT6 434 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 COLEC10Q9Y6Z7 277 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 TRANK1O15050 2925 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ZNF724A8MTY0 619 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 AGR2O95994 175 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CST4P01036 141 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 S1PR1P21453 382 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 OMGP23515 440 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 CYCSP99999 105 aaKnown RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 SLC17A1Q14916 467 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 ZFP62Q8NB50 900 aaPredicted RBP10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 AQP3Q92482 292 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 FOXQ1Q9C009 403 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 OR11A1Q9GZK7 315 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 UBQLN4Q9NRR5 601 aa10.03□□□□□ -0.8
SEC61A1-202ENST00000424880 MYO7BQ6PIF6 2116 aa10.02□□□□□ -0.8
SEC61A1-202ENST00000424880 A0A087WUJ7 227 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 TOX3O15405 576 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 PGA3P0DJD8 388 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 FOSL2P15408 326 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 PPM1AP35813 382 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 EIF5AP63241 154 aaKnown RBP10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 DLK1P80370 383 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 ENPP2Q13822 863 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 CEBPEQ15744 281 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 ZNF880Q6PDB4 577 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 VITQ6UXI7 678 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 EXD3Q8N9H8 876 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 OR10J5Q8NHC4 309 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 IL23AQ9NPF7 189 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 SIRT7Q9NRC8 400 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 VSX1Q9NZR4 365 aaPredicted RBP10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 ARPC3O15145 178 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 MPIG6BO95866 241 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 VSIG8P0DPA2 414 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 LYL1P12980 280 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 MMP9P14780 707 aa10.02□□□□□ -0.81
SEC61A1-202ENST00000424880 CFPP27918 469 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms