RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, human

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-205	ENST00000423113	TGFB1	P01137	390 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	GCG	P01275	180 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	SERPINA7	P05543	415 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	CD46	P15529	392 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	S100G	P29377	79 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	HOXC12	P31275	282 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	GRK6	P43250	576 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	GPR1	P46091	355 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	LIM2	P55344	173 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	UCP3	P55916	312 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	KLF3	P57682	345 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	MC1R	Q01726	317 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	ZNF345	Q14585	488 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	ZNF774	Q6NX45	483 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	NUP54	Q7Z3B4	507 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	TMEFF1	Q8IYR6	380 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	D2HGDH	Q8N465	521 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	METTL21A	Q8WXB1	218 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	MOAP1	Q96BY2	351 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	PGAM5	Q96HS1	289 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	MS4A10	Q96PG2	267 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	CIB3	Q96Q77	187 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	TAAR9	Q96RI9	348 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	WRAP53	Q9BUR4	548 aa	Known RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	VAMP8	Q9BV40	100 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	OR2J1	Q9GZK6	312 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	SLC25A31	Q9H0C2	315 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	NRIP3	Q9NQ35	241 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	HINT3	Q9NQE9	182 aa	Known RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	TAAR2	Q9P1P5	351 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	TES	Q9UGI8	421 aa	Known RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	LAMP3	Q9UQV4	416 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113	CUL9	Q8IWT3	2517 aa		4.37	□□□□□ -1.71
ITGB1-205	ENST00000423113		A0A1B0GVT2	93 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113		A6NIZ1	184 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113		H0YIV9	168 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	EML2	O95834	649 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	IFNA21	P01568	189 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	CD74	P04233	296 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	FGF5	P12034	268 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	GRPR	P30550	384 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	HNRNPA3	P51991	378 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RIPPLY3	P57055	190 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	TAS2R50	P59544	299 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	GAGE1	Q13065	139 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	LASP1	Q14847	261 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	VWA2	Q5GFL6	755 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	LDLRAD2	Q5SZI1	272 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	TCTN3	Q6NUS6	607 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	OLIG3	Q7RTU3	272 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	AMZ2	Q86W34	360 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	NRM	Q8IXM6	262 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	CMTM1	Q8IZ96	169 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	GCNT2	Q8N0V5	402 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ARIH2OS	Q8N7S6	290 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	OR6N1	Q8NGY5	312 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	GALNT14	Q96FL9	552 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	SDSL	Q96GA7	329 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ZNF426	Q9BUY5	554 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ADAM19	Q9H013	955 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	TUBA4B	Q9H853	241 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	MYNN	Q9NPC7	610 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	SOHLH2	Q9NX45	425 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	TBC1D29	Q9UFV1	150 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RAB22A	Q9UL26	194 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ABCA7	Q8IZY2	2146 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RNF222	A6NCQ9	220 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	SLC22A31	A6NKX4	558 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	IDS	B3KWA1	339 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	PPP5D1	E7EU14	171 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113		H0Y8X5	98 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RAB29	O14966	203 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	IGHA1	P01876	353 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	CFI	P05156	583 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	OR5G3	P0C626	314 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	TBC1D3H	P0C7X1	549 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	HOXB9	P17482	250 aa	Predicted RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	HTR1F	P30939	366 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RPS23	P62266	143 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	IGLV3-21	P80748	117 aa	Predicted RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	CDK5	Q00535	292 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ZNF763	Q0D2J5	394 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ST3GAL3	Q11203	375 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	PGGHG	Q32M88	737 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	TBC1D3G	Q6DHY5	549 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	NPSR1	Q6W5P4	371 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	LINC01555	Q8NAE3	123 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	C17orf47	Q8NEP4	570 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	SNIP1	Q8TAD8	396 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RLN3	Q8WXF3	142 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	NAT6	Q93015	286 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	ZMYND19	Q96E35	227 aa	Predicted RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	RCC1L	Q96I51	464 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	AIF1L	Q9BQI0	150 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	NUDT9	Q9BW91	350 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	SAMD10	Q9BYL1	202 aa		4.36	□□□□□ -1.71
ITGB1-205	ENST00000423113	BRF2	Q9HAW0	419 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms