RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GASTP01350 101 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 S100A3P33764 101 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 HTR6P50406 440 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 LILRA4P59901 499 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 UBE2MP61081 183 aaKnown RBP4.65□□□□□ -1.66
HERC4-205ENST00000412272 RPS14P62263 151 aaKnown RBP4.65□□□□□ -1.66
HERC4-205ENST00000412272 VAMP3Q15836 100 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.65□□□□□ -1.664e-6■■■■□ 20.5
HERC4-205ENST00000412272 RNASE12Q5GAN4 147 aaKnown RBP4.65□□□□□ -1.66
HERC4-205ENST00000412272 UBE2NLQ5JXB2 153 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 GRHL2Q6ISB3 625 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 LCTLQ6UWM7 567 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 PLPP5Q8NEB5 264 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 OR51F2Q8NH61 342 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 TMEM106AQ96A25 262 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 SLC46A2Q9BY10 475 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 UFC1Q9Y3C8 167 aa4.65□□□□□ -1.66
HERC4-205ENST00000412272 TRBV6-7A0A0A0MS04 114 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 IGKV6D-21A0A0A0MT36 114 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 UMAD1C9J7I0 102 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 HSD17B6O14756 317 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 PDE6DO43924 150 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 FAM87AP0C7U9 286 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 ZNF865P0CJ78 1059 aaPredicted RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 OR5H8P0DN80 308 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 OR12D1P0DN82 309 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 TPT1P13693 172 aaKnown RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 MMP11P24347 488 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 RPL4P36578 427 aaKnown RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 PCBP3P57721 371 aaKnown RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 OR7A5Q15622 319 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 DUSP28Q4G0W2 176 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 SPIN3Q5JUX0 258 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 C11orf87Q6NUJ2 197 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 ABHD15Q6UXT9 468 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 LINC00696Q6ZRV3 163 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 TMPRSS12Q86WS5 348 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 APOBEC3FQ8IUX4 373 aaKnown RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 FAM169BQ8N8A8 192 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 SH3RF2Q8TEC5 729 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 PIGTQ969N2 578 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 PTX4Q96A99 478 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 KTI12Q96EK9 354 aaPredicted RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 TCEAL2Q9H3H9 227 aaPredicted RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 GCM1Q9NP62 436 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 FGF21Q9NSA1 209 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 FARSAQ9Y285 508 aaKnown RBP4.65□□□□□ -1.67
HERC4-205ENST00000412272 LCTP09848 1927 aa4.65□□□□□ -1.67
HERC4-205ENST00000412272 SHROOM3Q8TF72 1996 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 C2orf72A6NCS6 295 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 H7BYZ3 331 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 CFIP05156 583 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 STC1P52823 247 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 CDKN3Q16667 212 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 HLA-BQ31612 363 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 LINC00303Q3SY05 128 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ZNF260Q3ZCT1 412 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 DND1Q8IYX4 353 aaKnown RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 MUC20Q8N307 709 aaPredicted RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 MTURNQ8N3F0 131 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 OR4X1Q8NH49 305 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 HMGB4Q8WW32 186 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ELL3Q9HB65 397 aaPredicted RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 LRTM1Q9HBL6 345 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SLC7A10Q9NS82 523 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 TMEM160Q9NX00 188 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 VPREB3Q9UKI3 123 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 UBR3Q6ZT12 1888 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 PLXNB2O15031 1838 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 A0A1B0GW64 132 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ODAMA1E959 279 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 LYL1P12980 280 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 PPOXP50336 477 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 IL13RA1P78552 427 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 TLE3Q04726 772 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SSBP1Q04837 148 aaKnown RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 PMS2P11Q13670 270 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 DOK7Q18PE1 504 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 TP53INP2Q8IXH6 220 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SLC38A9Q8NBW4 561 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 SLC26A10Q8NG04 563 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 GPR119Q8TDV5 335 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 TMEM18Q96B42 140 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 APH1AQ96BI3 265 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 TRIB1Q96RU8 372 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 LRFN3Q9BTN0 628 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 INPP5EQ9NRR6 644 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 RASD1Q9Y272 281 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ARL5AQ9Y689 179 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 MYO10Q9HD67 2058 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 A0A1B0GUS0 222 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 MSTNO14793 375 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 PLPP2O43688 288 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ATF1P18846 271 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ATP5IP56385 69 aaPredicted RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 RPL38P63173 70 aaKnown RBP4.64□□□□□ -1.67
HERC4-205ENST00000412272 SRPXP78539 464 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ARHGAP1Q07960 439 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ZNF585BQ52M93 769 aa4.64□□□□□ -1.67
HERC4-205ENST00000412272 ENTPD8Q5MY95 495 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms