RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 FARS2O95363 451 aaKnown RBP0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 PGA4P0DJD7 388 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 PGA3P0DJD8 388 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF24P17028 368 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 GZMHP20718 246 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR1E1P30953 314 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 APLNRP35414 380 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC1A1P43005 524 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 LGALS7P47929 136 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 RAB7AP51149 207 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 KRTAP10-4P60372 401 aaPredicted RBP0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 IL24Q13007 206 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 GPM6BQ13491 265 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CUL2Q13617 745 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CCL15Q16663 113 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 RNASEKQ6P5S7 137 aaKnown RBP0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 TMEM107Q6UX40 140 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 TMPRSS11AQ6ZMR5 421 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 RUFY3Q7L099 469 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CMC1Q7Z7K0 106 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF567Q8N184 647 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 BPIFCQ8NFQ6 507 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CAPSLQ8WWF8 208 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 ITLN2Q8WWU7 325 aaPredicted RBP0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 YIPF5Q969M3 257 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC25A44Q96H78 314 aaPredicted RBP0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 PISDQ9UG56 409 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CES1P1Q9UKY3 287 aa0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 CAB39Q9Y376 341 aaPredicted RBP0.38□□□□□ -2.35
RNU2-54P-201ENST00000410299 COL4A1P02462 1669 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 A0A0A6YYD5 115 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 A6NDN8 102 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 PSCAO43653 123 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 HPRT1P00492 218 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 TRBV12-3P01733 135 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 IGHV3-53P01767 116 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 USF1P22415 310 aaPredicted RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 MYL9P24844 172 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 PFN2P35080 140 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 MYCNOSP40205 109 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 PRPHP41219 470 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 TRAM2Q15035 370 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 LGALSLQ3ZCW2 172 aaPredicted RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 C6orf99Q4VX62 202 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 LRRC23Q53EV4 343 aaPredicted RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 MFSD14CQ5VZR4 134 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 KCTD16Q68DU8 428 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 TTC19Q6DKK2 380 aaPredicted RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC8B1Q6J4K2 584 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 REEP3Q6NUK4 255 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 PDPNQ86YL7 162 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 LRRC8AQ8IWT6 810 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 EIF1ADQ8N9N8 165 aaKnown RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 SGTBQ96EQ0 304 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 UQCC2Q9BRT2 126 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 HIGD2AQ9BW72 106 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 ILKAPQ9H0C8 392 aaPredicted RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 SND1-IT1Q9HBX3 110 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 FAM60AQ9NP50 221 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 HYPKQ9NX55 129 aa0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 STX18Q9P2W9 335 aaKnown RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 MDC1Q14676 2089 aaKnown RBP0.37□□□□□ -2.35
RNU2-54P-201ENST00000410299 KMT2DO14686 5537 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 SIRPB1O00241 398 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 NME4O00746 187 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC9A3R1O14745 358 aaPredicted RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 CLOCKO15516 846 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 CDH16O75309 829 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR2J3O76001 311 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 DESP17661 470 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 RAB4AP20338 218 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 IL3RAP26951 378 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 PBLDP30039 288 aaPredicted RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 TNNT2P45379 298 aaPredicted RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 RGS6P49758 472 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 CCL23P55773 120 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 RPL23AP62750 156 aaKnown RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 SELENBP1Q13228 472 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 MRPL23Q16540 153 aaKnown RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 HSP90AB3PQ58FF7 597 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 PRAMEF5Q5TYX0 476 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 HHATQ5VTY9 493 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 PRAMEF6Q5VXH4 476 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 TMEM236Q5W0B7 351 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZNF322Q6U7Q0 402 aaPredicted RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 METAP1DQ6UB28 335 aaPredicted RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 SLC16A14Q7RTX9 510 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 TMEM144Q7Z5S9 345 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 NBPF5PQ86XG9 351 aaPredicted RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 LYPD6Q86Y78 171 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 UBE2J2Q8N2K1 259 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 ZCCHC7Q8N3Z6 543 aaKnown RBP0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 DNAAF3Q8N9W5 541 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR10W1Q8NGF6 305 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 OR5K2Q8NHB8 316 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 KCNG3Q8TAE7 436 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 FXYD5Q96DB9 178 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 YIPF6Q96EC8 236 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 DYNLL2Q96FJ2 89 aa0.36□□□□□ -2.35
RNU2-54P-201ENST00000410299 DERL3Q96Q80 235 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms