RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 B4DSR2 109 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM178BH3BS89 294 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 J3QRE1 110 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 MAGEB4O15481 346 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 SRSF10O75494 262 aaKnown RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 PTBP3O95758 552 aaKnown RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 CST4P01036 141 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 IGLV3-1P01715 115 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 TTRP02766 147 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 PCMT1P22061 227 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 BTG1P62324 171 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ADARB1P78563 741 aaKnown RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 RIPPLY1Q0D2K3 151 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 MED21Q13503 144 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM155Q4W5P6 130 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF684Q5T5D7 378 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 DOK3Q7L591 496 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 CATSPERDQ86XM0 798 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 EGFL6Q8IUX8 553 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ZDHHC23Q8IYP9 409 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ELMOD2Q8IZ81 293 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 C8orf59Q8N0T1 100 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 KLHL36Q8N4N3 616 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 CCDC54Q8NEL0 328 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF420Q8TAQ5 688 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 OR51E1Q8TCB6 317 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 Q8TCH9 128 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 PIGCQ92535 297 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 DVL3Q92997 716 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 FAM71F1Q96KD3 344 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 LYZL4Q96KX0 146 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 RTL8AQ9BWD3 113 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 G6PC2Q9NQR9 355 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ACOXLQ9NUZ1 547 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 MRPS18AQ9NVS2 196 aaKnown RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 NKX1-2Q9UD57 310 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ENPP5Q9UJA9 477 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 PCDHB10Q9UN67 800 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 RHBDD3Q9Y3P4 386 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ZFHX3Q15911 3703 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 LOC100289279A0A1B0GTE1 492 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 A0A1B0GVI7 797 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM210A6NLX4 147 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 DHRS7CA6NNS2 312 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 FAM20BO75063 409 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 CLIC3O95833 236 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 CYB5R3P00387 301 aaPredicted RBP9.19□□□□□ -0.94
CHMP3-205ENST00000409810 PNPP00491 289 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 IGHV2-70P01814 119 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 HTR1AP08908 422 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 UBCP0CG48 685 aaKnown RBP9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF12P17014 697 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ACKR3P25106 362 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 IL2RGP31785 369 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 MDH2P40926 338 aaKnown RBP9.19□□□□□ -0.94
CHMP3-205ENST00000409810 RIPPLY3P57055 190 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ISL1P61371 349 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 MRPL28Q13084 256 aaKnown RBP9.19□□□□□ -0.94
CHMP3-205ENST00000409810 PRDX4Q13162 271 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 GALEQ14376 348 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 KCNJ8Q15842 424 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 TP53I3Q53FA7 332 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 PRAMEF6Q5VXH4 476 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF771Q7L3S4 317 aaPredicted RBP9.19□□□□□ -0.94
CHMP3-205ENST00000409810 SYS1Q8N2H4 156 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 CNIH3Q8TBE1 160 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 RORBQ92753 470 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 MSI2Q96DH6 328 aaKnown RBP9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 C1orf159Q96HA4 380 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ALG8Q9BVK2 526 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 PLEKHA1Q9HB21 404 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 AMBNQ9NP70 447 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 TRIM36Q9NQ86 728 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 UFSP2Q9NUQ7 469 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 UBAP1Q9NZ09 502 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 RNF7Q9UBF6 113 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 PIGLQ9Y2B2 252 aa9.19□□□□□ -0.94
CHMP3-205ENST00000409810 PPIAL4EA0A075B759 164 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 IGHV3-64DA0A0J9YX35 117 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 hCG_1807616A0A1W2PRN6 198 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF850A8MQ14 1090 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 PPIAL4DF5H284 164 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 H0YJX3 145 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 J3QLW9 94 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 P2RY10O00398 339 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 WNT9BO14905 357 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 SYT7O43581 403 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 LMX1BO60663 402 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 WBP4O75554 376 aaKnown RBP9.18□□□□□ -0.94
CHMP3-205ENST00000409810 FSTL3O95633 263 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 TGFAP01135 160 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 IGHV2-5P01817 119 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 IGHA1P01876 353 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 GRPP07492 148 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 RPSAP08865 295 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms