RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 GDF2Q9UK05 429 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 R4GMQ9 66 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 TRAV14DV4A0A0A6YYC5 116 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 A0A0A6YYH2 397 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 IGLV1-36A0A0B4J1U3 117 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 IGHV5-10-1A0A0J9YXX1 117 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 A6NJ64 397 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 FBXO24O75426 580 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CBR1P16152 277 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CD96P40200 585 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CSNK1A1P48729 337 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CATSPERDQ86XM0 798 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 RPS4Y2Q8TD47 263 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 PIGCQ92535 297 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 HDHD3Q9BSH5 251 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 PAPOLGQ9BWT3 736 aaKnown RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 CALHM2Q9HA72 323 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 PRMT8Q9NR22 394 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-204ENST00000409416 LUZP4Q9P127 313 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 MYOTQ9UBF9 498 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 MMACHCQ9Y4U1 282 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 DCHS1Q96JQ0 3298 aa11.87□□□□□ -0.51
COL6A2-204ENST00000409416 BLVRBP30043 206 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 BDKRB2P30411 391 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 AGTR1P30556 359 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF468Q5VIY5 522 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ZFP82Q8N141 532 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 IL22RA1Q8N6P7 574 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 RASL10BQ96S79 203 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 PHB2Q99623 299 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ADAT1Q9BUB4 502 aaKnown RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 PBOV1Q9GZY1 135 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 EXOSC3Q9NQT5 275 aaKnown RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 MRPS28Q9Y2Q9 187 aaKnown RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 MUC6Q6W4X9 2439 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 SOCS1O15524 211 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 TLX3O43711 291 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 IGHG1P01857 330 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 CX3CR1P49238 355 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 PLGLB1Q02325 96 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 SP6Q3SY56 376 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 SPEM1Q8N4L4 309 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 TMEM229BQ8NBD8 167 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 OR5L2Q8NGL0 311 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 TSNAXQ99598 290 aaKnown RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 IGF2RP11717 2491 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ATMQ13315 3056 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ATG12O94817 140 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 RAB3AP20336 220 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ANOS1P23352 680 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF169Q14929 603 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 SPINK14Q6IE38 97 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 BPIFCQ8NFQ6 507 aa11.86□□□□□ -0.51
COL6A2-204ENST00000409416 RBM7Q9Y580 266 aaKnown RBP11.86□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF208O43345 1280 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 MT-ATP6P00846 226 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 CD79AP11912 226 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 PNLIPRP2P54317 469 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 RRADP55042 308 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 GABREP78334 506 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 TMEM71Q6P5X7 295 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 THRSPQ92748 146 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 TREM1Q9NP99 234 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 BLACEA4D250 179 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 FAM74A7A6NL05 159 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 ADAP1O75689 374 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 ITGB2P05107 769 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 UBBP0CG47 229 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 UBA52P62987 128 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 TMEM244Q5VVB8 128 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 C11orf87Q6NUJ2 197 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 MEX3BQ6ZN04 569 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 RPS19BP1Q86WX3 136 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF519Q8TB69 540 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 HES7Q9BYE0 225 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 ARRDC1-AS1Q9H2J1 176 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 PLCE1Q9P212 2302 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 ZNF850A8MQ14 1090 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 TP53I11O14683 189 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 IGKV3-11P04433 115 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 GALNSP34059 522 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 DAP3P51398 398 aaKnown RBP11.85□□□□□ -0.51
COL6A2-204ENST00000409416 DHODHQ02127 395 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 FGL1Q08830 312 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 PHLDA2Q53GA4 152 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 SPATA46Q5T0L3 261 aa11.85□□□□□ -0.51
COL6A2-204ENST00000409416 OR2W3Q7Z3T1 314 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms