RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ZNF611Q8N823 705 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 PLPP7Q8NBV4 271 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 HAVCR2Q8TDQ0 301 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 TRMT61AQ96FX7 289 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 NKX3-1Q99801 234 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 DYNLRB1Q9NP97 96 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 ISYNA1Q9NPH2 558 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 DHDHQ9UQ10 334 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 SF3B6Q9Y3B4 125 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 CHD3Q12873 2000 aaKnown RBP12.02□□□□□ -0.48
CHRNA1-204ENST00000409323 VSTM5A8MXK1 200 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 M0R233 179 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 CCRL2O00421 344 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 MLNRO43193 412 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 MTRF1O75570 445 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 GOSR1O95249 250 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 CFL1P23528 166 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 TGFBR2P37173 567 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 GNALP38405 381 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 FABP5Q01469 135 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 RIPPLY1Q0D2K3 151 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 SWI5Q1ZZU3 235 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 SLC16A12Q6ZSM3 486 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 GPR148Q8TDV2 347 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 RAB2BQ8WUD1 216 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 TMEM106AQ96A25 262 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 FUNDC2Q9BWH2 189 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 CACNG6Q9BXT2 260 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 OR51E2Q9H255 320 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 OPA3Q9H6K4 179 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF275Q9NSD4 429 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 CBLN4Q9NTU7 201 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 PLEKHA6Q9Y2H5 1048 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 CENPEQ02224 2701 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 SPG11Q96JI7 2443 aa12.02□□□□□ -0.49
CHRNA1-204ENST00000409323 PLSCR5A0PG75 271 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ANKRD30BLA7E2S9 258 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 B9A039 149 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 F5H5P2 479 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 LY6HO94772 140 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 CD36P16671 472 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF20P17024 532 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 GADD45AP24522 165 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF81P51508 661 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 SNRPD2P62316 118 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 PRDX4Q13162 271 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 EFNB3Q15768 340 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ACSM3Q53FZ2 586 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 YIF1BQ5BJH7 314 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 AGAP6Q5VW22 663 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 GPR107Q5VW38 600 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 MOB3CQ70IA8 216 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TRMT10AQ8TBZ6 339 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 C12orf43Q96C57 262 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 CCL19Q99731 98 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TRAF4Q9BUZ4 470 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 FGF23Q9GZV9 251 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 PPIL3Q9H2H8 161 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 EXOSC4Q9NPD3 245 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 FAIMQ9NVQ4 179 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 NDUFB11Q9NX14 153 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TAS2R4Q9NYW5 299 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TREM2Q9NZC2 230 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ENPP5Q9UJA9 477 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF391Q9UJN7 358 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF816-ZNF321PA0A0X1KG74 233 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ZNF879B4DU55 563 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 PIN1P1O15428 100 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 NDUFS7O75251 213 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 GABARAPO95166 117 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TUBG1P23258 451 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 GABRA5P31644 462 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 CCL8P80075 99 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 CTF1Q16619 201 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ASPHD2Q6ICH7 369 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TMEM91Q6ZNR0 172 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 CEACAM19Q7Z692 300 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 DTX2Q86UW9 622 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 OR13C9Q8NGT0 318 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 RPL3LQ92901 407 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 SPACA5Q96QH8 159 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 ADAT1Q9BUB4 502 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 RNF167Q9H6Y7 350 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 NOX4Q9NPH5 578 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 TMEM100Q9NV29 134 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 PTTG2Q9NZH5 202 aa12.01□□□□□ -0.49
CHRNA1-204ENST00000409323 NBPF19A0A087WUL8 3843 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 BAHCC1Q9P281 2608 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 LOC100506127A0A0U1RQW1 187 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 LOC390937A0A1W2PQ73 354 aa12□□□□□ -0.49
CHRNA1-204ENST00000409323 H3BMQ9 156 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms