RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 GLRA1P23415 457 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 PPICP45877 212 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 YPEL5P62699 121 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 VN1R2Q8NFZ6 395 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 EMC6Q9BV81 110 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 SMDT1Q9H4I9 107 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 MYOTQ9UBF9 498 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 SF3B6Q9Y3B4 125 aaKnown RBP15.9■□□□□ 0.14
SMPD4-202ENST00000409031 HSPB6O14558 160 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 PGA3P0DJD8 388 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 VSIG10L2P0DP72 767 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 OR10J5Q8NHC4 309 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 GAS2L1Q99501 681 aaPredicted RBP15.9■□□□□ 0.14
SMPD4-202ENST00000409031 CHST6Q9GZX3 395 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 DSPPQ9NZW4 1301 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 TTC3P53804 2025 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 GALR1P47211 349 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 UBE2NP61088 152 aaKnown RBP15.9■□□□□ 0.14
SMPD4-202ENST00000409031 DCAF12L2Q5VW00 463 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 DMBX1Q8NFW5 382 aa15.9■□□□□ 0.14
SMPD4-202ENST00000409031 BSCL2Q96G97 398 aaPredicted RBP15.9■□□□□ 0.14
SMPD4-202ENST00000409031 EIF1BO60739 113 aaKnown RBP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 ETFRF1Q6IPR1 90 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF793Q6ZN11 406 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 OR10P1Q8NGE3 313 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 MS4A3Q96HJ5 214 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 HHIPQ96QV1 700 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 TLNRD1Q9H1K6 362 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 HEYLQ9NQ87 328 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 ECH1Q13011 328 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 RUNX2Q13950 521 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 AARDQ4LEZ3 155 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 DEGS2Q6QHC5 323 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 SLCO1B1Q9Y6L6 691 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 MPGP29372 298 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 SURF2Q15527 256 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 OR2C3Q8N628 320 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 OR52N4Q8NGI2 321 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 CPT1CQ8TCG5 803 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 GPA33Q99795 319 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 DNMT3BQ9UBC3 853 aaKnown RBP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 VSTM5A8MXK1 200 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 MUC1P15941 1255 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 EIF1P41567 113 aaKnown RBP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMPD4-202ENST00000409031 TIGITQ495A1 244 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF600Q6ZNG1 722 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 ITGB4P16144 1822 aa15.89■□□□□ 0.13
SMPD4-202ENST00000409031 OR2A4O95047 310 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 YIF1AO95070 293 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 MSX1P28360 303 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 C19orf48Q6RUI8 117 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 C16orf52Q8NHV5 167 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SNX22Q96L94 193 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 OR2A7Q96R45 310 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 MMP25Q9NPA2 562 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SIRT4Q9Y6E7 314 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SIGLEC5O15389 551 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 AKR7A3O95154 331 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SIGLEC14Q08ET2 396 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 KIAA0895LQ68EN5 471 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 CLEC18BQ6UXF7 455 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 TCTEX1D1Q8N7M0 179 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 OR10A7Q8NGE5 316 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 TRBV11-1A0A0K0K1C0 115 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 TRAF3IP2O43734 574 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-202ENST00000409031 NKX2-2O95096 273 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SEC11BP0C7V7 166 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 HAAOP46952 286 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SLC37A1P57057 533 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 POLR2GP62487 172 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SP6Q3SY56 376 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 SHISA6Q6ZSJ9 500 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 GTF2H5Q6ZYL4 71 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 FAM3CQ92520 227 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 GDE1Q9NZC3 331 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 CD1AP06126 327 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 Q6ZNB5 142 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-202ENST00000409031 DEFB119Q8N690 84 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 TMEM104Q8NE00 496 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 FBXO17Q96EF6 278 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 CTDSP1Q9GZU7 261 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 PSENENQ9NZ42 101 aa15.88■□□□□ 0.13
SMPD4-202ENST00000409031 MRM2Q9UI43 246 aaKnown RBP15.88■□□□□ 0.13
SMPD4-202ENST00000409031 TRIP11Q15643 1979 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 A0A1B0GTH9 108 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 PTGER4P35408 488 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 OR4A16Q8NH70 328 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 SLC25A43Q8WUT9 341 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-202ENST00000409031 LIMS1P48059 325 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 OTPQ5XKR4 325 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 SLC35G3Q8N808 338 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 TAAR9Q96RI9 348 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF816-ZNF321PA0A0X1KG74 233 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 RPLP1P05386 114 aaKnown RBP15.87■□□□□ 0.13
SMPD4-202ENST00000409031 DHRS7BQ6IAN0 325 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-202ENST00000409031 DRAM2Q6UX65 266 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms