RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 OR1Q1Q15612 314 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 C5orf64Q2M2E5 130 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 HIKESHIQ53FT3 197 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 PLCXD3Q63HM9 321 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 OPN5Q6U736 354 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 TMCO2Q7Z6W1 182 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-202ENST00000407343 KIF2BQ8N4N8 673 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 LRRC52Q8N7C0 313 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 INO80EQ8NBZ0 244 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-202ENST00000407343 ZFP3Q96NJ6 502 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 IP6K3Q96PC2 410 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 SCGB3A2Q96PL1 93 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 CSPG4P5Q96PW8 444 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 KCNS3Q9BQ31 491 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 NUDT9Q9BW91 350 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 TREX1Q9NSU2 369 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 MCUBQ9NWR8 336 aa3.17□□□□□ -1.9
PTPN12-202ENST00000407343 RABL2AQ9UBK7 228 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-202ENST00000407343 C16orf90A8MZG2 172 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 MPDU1O75352 247 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 RNASE2P10153 161 aaKnown RBP3.16□□□□□ -1.9
PTPN12-202ENST00000407343 OR1G1P47890 313 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 DNAJC3Q13217 504 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 TFDP2Q14188 446 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 UBAC2Q8NBM4 344 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 FBXO8Q9NRD0 319 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 PSME2Q9UL46 239 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 FARSAQ9Y285 508 aaKnown RBP3.16□□□□□ -1.9
PTPN12-202ENST00000407343 SIGLEC7Q9Y286 467 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 HES2Q9Y543 173 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 SCN4AP35499 1836 aa3.16□□□□□ -1.9
PTPN12-202ENST00000407343 LINC01619G3V211 115 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 FARS2O95363 451 aaKnown RBP3.15□□□□□ -1.91
PTPN12-202ENST00000407343 DAOAP59103 153 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 C6orf99Q4VX62 202 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 OR2T5Q6IEZ7 315 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 OTUD6AQ7L8S5 288 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 TRAM1L1Q8N609 369 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 OR2T29Q8NH02 315 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 ENKURQ8TC29 256 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 KLF14Q8TD94 323 aaPredicted RBP3.15□□□□□ -1.91
PTPN12-202ENST00000407343 ASZ1Q8WWH4 475 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 ISG20Q96AZ6 181 aaKnown RBP3.15□□□□□ -1.91
PTPN12-202ENST00000407343 S100PBPQ96BU1 408 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 WDR34Q96EX3 536 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 DHX35Q9H5Z1 703 aaKnown RBP3.15□□□□□ -1.91
PTPN12-202ENST00000407343 LINC00574Q9H8X3 128 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 REEP1Q9H902 201 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 CRLF2Q9HC73 371 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 PEF1Q9UBV8 284 aaKnown RBP3.15□□□□□ -1.91
PTPN12-202ENST00000407343 LRRC42Q9Y546 428 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 OR51B2Q9Y5P1 312 aa3.15□□□□□ -1.91
PTPN12-202ENST00000407343 GFAPP14136 432 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 NTF3P20783 257 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 AP1S2P56377 157 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 IFITM3Q01628 133 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 TSC22D1Q15714 1073 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 STEAP4Q687X5 459 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 MRPL21Q7Z2W9 205 aaKnown RBP3.14□□□□□ -1.91
PTPN12-202ENST00000407343 MDP1Q86V88 176 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 PROKR2Q8NFJ6 384 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 RERGQ96A58 199 aaPredicted RBP3.14□□□□□ -1.91
PTPN12-202ENST00000407343 ISOC2Q96AB3 205 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 IQCGQ9H095 443 aaKnown RBP3.14□□□□□ -1.91
PTPN12-202ENST00000407343 NCOR1P1Q9H4R4 102 aa3.14□□□□□ -1.91
PTPN12-202ENST00000407343 C2orf16Q68DN1 1984 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 ARPC4-TTLL3A0A0A6YYG9 625 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 ZNF233A6NK53 670 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 M0R1X1 148 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 CXCR1P25024 350 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 PSMB5P28074 263 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 TAS2R39P59534 338 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 FUT5Q11128 374 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 ERO1BQ86YB8 467 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 DAW1Q8N136 415 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 APCDD1LQ8NCL9 501 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 CDS1Q92903 461 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 EMC6Q9BV81 110 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 ZC4H2Q9NQZ6 224 aa3.13□□□□□ -1.91
PTPN12-202ENST00000407343 VGLL3A8MV65 326 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 H3BN98 237 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 POLR1CO15160 346 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-202ENST00000407343 PSPHP1O15172 72 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 CHMP2AO43633 222 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 RALBP11234 206 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 CFHR2P36980 270 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 FAM53BQ14153 422 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 DMC1Q14565 340 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 KLHL40Q2TBA0 621 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 DEGS2Q6QHC5 323 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 TMPRSS11AQ6ZMR5 421 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 C16orf47Q6ZP98 133 aaPredicted RBP3.12□□□□□ -1.91
PTPN12-202ENST00000407343 STK40Q8N2I9 435 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 DCAKDQ8WVC6 231 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 RXFP2Q8WXD0 754 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 CERS2Q96G23 380 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 SMARCD1Q96GM5 515 aa3.12□□□□□ -1.91
PTPN12-202ENST00000407343 DHCR7Q9UBM7 475 aaKnown RBP3.12□□□□□ -1.91
PTPN12-202ENST00000407343 SHANK1Q9Y566 2161 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms